| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is btuE [H]
Identifier: 153949548
GI number: 153949548
Start: 1990420
End: 1990974
Strand: Direct
Name: btuE [H]
Synonym: YpsIP31758_1721
Alternate gene names: 153949548
Gene position: 1990420-1990974 (Clockwise)
Preceding gene: 153948990
Following gene: 153950434
Centisome position: 42.14
GC content: 44.5
Gene sequence:
>555_bases ATGAGTCACCCAATTTACGCCATTTCAGTGCAAACGATTGATCACCAGCTGGTTAAGTTGGCGAAGTATAAAGGTTCCGT TTTATTAGTGGTGAATGTGGCTTCGCAATGTGGTTTGACTCAGCAATATGAAGGATTAGAAAGCCTCTATAAAACCTATC AGAAGCAAGGTTTTGAGGTTTTAGGTTTCCCGAGTAATGAGTTTGCAGGACAAGAGCCTGGCAGTGATGAGGAAATTCAT GCTTTCTGCCGTGGTACTTTTGGTGTCGACTTCCCCATGTTCAGTAAAATTGAAGTCAATGGTCCACATCGGCATCCTCT ATATCAGCACTTGGTTACTGCTAAGCCTGTTGCAGTGAAACCGGAAGGAAGTGAATTTTATCAACGCCTGGCGAGTAAAG GCCGTGAGCCAAAACAGCCGGGTGATATCCTATGGAATTTTGAGAAATTCTTGATTAGCCGTGATGGCACTGTCTTGGCG CGTTTTGCTCCAGATATGGCACCAGAAGCACCTATTTTAATCAATGCCATCAATCAGGCACTGGCTAGCCACTAA
Upstream 100 bases:
>100_bases GTTACTGATACGGGTGAAAGGAGTAAAGTGATTTGTCTTCTTATAAATGCCGCGGTGATTTTACCGGTTTATTATCATTA CTGAATAAGGATCCAACCTG
Downstream 100 bases:
>100_bases ATTACGGGTAACGAGTTTATTTTGATGCTATTGCAACTCAACAATGTCAGCGTAGGAACCCGCCTTGCTTCTTTTTCTTC GCAGGTGACCACGGGGTTGC
Product: glutathione peroxidase
Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSHPIYAISVQTIDHQLVKLAKYKGSVLLVVNVASQCGLTQQYEGLESLYKTYQKQGFEVLGFPSNEFAGQEPGSDEEIH AFCRGTFGVDFPMFSKIEVNGPHRHPLYQHLVTAKPVAVKPEGSEFYQRLASKGREPKQPGDILWNFEKFLISRDGTVLA RFAPDMAPEAPILINAINQALASH
Sequences:
>Translated_184_residues MSHPIYAISVQTIDHQLVKLAKYKGSVLLVVNVASQCGLTQQYEGLESLYKTYQKQGFEVLGFPSNEFAGQEPGSDEEIH AFCRGTFGVDFPMFSKIEVNGPHRHPLYQHLVTAKPVAVKPEGSEFYQRLASKGREPKQPGDILWNFEKFLISRDGTVLA RFAPDMAPEAPILINAINQALASH >Mature_183_residues SHPIYAISVQTIDHQLVKLAKYKGSVLLVVNVASQCGLTQQYEGLESLYKTYQKQGFEVLGFPSNEFAGQEPGSDEEIHA FCRGTFGVDFPMFSKIEVNGPHRHPLYQHLVTAKPVAVKPEGSEFYQRLASKGREPKQPGDILWNFEKFLISRDGTVLAR FAPDMAPEAPILINAINQALASH
Specific function: Not essential for B12 transport; however, it is an auxiliary component of the transport system [H]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI15618997, Length=165, Percent_Identity=40, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI75709200, Length=174, Percent_Identity=39.0804597701149, Blast_Score=114, Evalue=4e-26, Organism=Homo sapiens, GI90903240, Length=174, Percent_Identity=39.0804597701149, Blast_Score=114, Evalue=6e-26, Organism=Homo sapiens, GI192455698, Length=161, Percent_Identity=36.6459627329193, Blast_Score=101, Evalue=3e-22, Organism=Homo sapiens, GI90903238, Length=147, Percent_Identity=40.1360544217687, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI4557629, Length=154, Percent_Identity=37.012987012987, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI6006001, Length=168, Percent_Identity=36.9047619047619, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI41406084, Length=166, Percent_Identity=35.5421686746988, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI33186887, Length=159, Percent_Identity=33.9622641509434, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI32967607, Length=171, Percent_Identity=30.4093567251462, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1788003, Length=182, Percent_Identity=59.8901098901099, Blast_Score=233, Evalue=8e-63, Organism=Caenorhabditis elegans, GI17506887, Length=166, Percent_Identity=39.7590361445783, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17535473, Length=166, Percent_Identity=39.1566265060241, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI193209493, Length=185, Percent_Identity=34.5945945945946, Blast_Score=112, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17550320, Length=185, Percent_Identity=34.0540540540541, Blast_Score=112, Evalue=9e-26, Organism=Caenorhabditis elegans, GI71993584, Length=165, Percent_Identity=34.5454545454545, Blast_Score=106, Evalue=5e-24, Organism=Caenorhabditis elegans, GI193210707, Length=171, Percent_Identity=35.672514619883, Blast_Score=99, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71993573, Length=94, Percent_Identity=36.1702127659575, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71999642, Length=78, Percent_Identity=35.8974358974359, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319721, Length=170, Percent_Identity=40, Blast_Score=136, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322228, Length=147, Percent_Identity=43.5374149659864, Blast_Score=130, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322826, Length=158, Percent_Identity=36.7088607594937, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI24656772, Length=166, Percent_Identity=36.144578313253, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI24656777, Length=166, Percent_Identity=36.144578313253, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI24656767, Length=166, Percent_Identity=36.144578313253, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI85726443, Length=168, Percent_Identity=35.1190476190476, Blast_Score=97, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: NA
Molecular weight: Translated: 20474; Mature: 20342
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPIYAISVQTIDHQLVKLAKYKGSVLLVVNVASQCGLTQQYEGLESLYKTYQKQGFEV CCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCHHHHHHHHHHHHHHHCCCEE LGFPSNEFAGQEPGSDEEIHAFCRGTFGVDFPMFSKIEVNGPHRHPLYQHLVTAKPVAVK EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEC PEGSEFYQRLASKGREPKQPGDILWNFEKFLISRDGTVLARFAPDMAPEAPILINAINQA CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH LASH HHCC >Mature Secondary Structure SHPIYAISVQTIDHQLVKLAKYKGSVLLVVNVASQCGLTQQYEGLESLYKTYQKQGFEV CCCEEEEEHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCHHHHHHHHHHHHHHHCCCEE LGFPSNEFAGQEPGSDEEIHAFCRGTFGVDFPMFSKIEVNGPHRHPLYQHLVTAKPVAVK EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEC PEGSEFYQRLASKGREPKQPGDILWNFEKFLISRDGTVLARFAPDMAPEAPILINAINQA CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH LASH HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]
Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3528129; 9097039; 9278503 [H]