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The map label for this gene is ypjD [H]

Identifier: 153949522

GI number: 153949522

Start: 3636789

End: 3637580

Strand: Direct

Name: ypjD [H]

Synonym: YpsIP31758_3231

Alternate gene names: 153949522

Gene position: 3636789-3637580 (Clockwise)

Preceding gene: 153950587

Following gene: 153950811

Centisome position: 77.0

GC content: 45.45

Gene sequence:

>792_bases
ATGCCCGTGTTTTCCATTTTGGCTTTGCTTGCTTATTCGCTCAGCTTGGGGCTGATTATCCCAAGTCTGGTGCGGAAAAA
TAGTGCTTACCGGCGGTTAGCGCTGGTTTCTGCCGTCGTGGCGCTAGTGTGCCATGCTATTGCCTTGAAAAATCAAATTT
TTGATGTTGGCGTTGGTCAGAATCTTACGTTACTGAACATCGGTTCCATTGTTGGGCTGATGATCTGTACGATTATGACC
ATTGTCGCTTCACAAGGGCGTGGCTGGTTTTTACTCCCTATTGTCTATAGCTTCGCCATGATCAATCTGGCGCTTGCCAG
CCTGCTTCCAGGGGAGTTTATTACCCATTTGGAAGCCAGCCCAGAGATATTTATCCACATCGGTCTGGCGCTTTTTGCTT
ATGCCACGCTTATCATCGCGGCGCTGTATGCGCTACAACTGGCTTGGCTTGATTATCAGTTAAAACATAAGAAACTGACG
TTTAATGCTGATATGCCGCCGTTAATGAGCATTGAACGAAAAATGTTCCATATCACCCAAATTGGGGTGGTATTACTTAC
ACTGACACTTTGTACCGGTTTGCTTTATATGGATAATCTCTTCAGTAAAGAAAATGTCCATAAAGCGGTGTTATCGATTA
TGGCCTGGTTTGTCTATATCGTTTTATTGTGGGGCCATTATCATGAAGGTTGGCGTGGACGTAGGGTCATTTGGTTCAGT
TTTGCGGGCGCCTTTCTACTTACACTGGCTTATTTTGGTAGCCGTCTGGTCCAGGAAATTATGGTTCGCTAG

Upstream 100 bases:

>100_bases
GCAAACGATCTCTGCCCTCACGTCGGAGAACGGTTGGAGAGGAACGCTCTCAACGCTATACTGGCTATCTAATTCCCTTA
GCCGATGCTCATATAACGCT

Downstream 100 bases:

>100_bases
TGATTACCGTAACCACCTACGCAAGGCCCAACGGAACTGGCTGAGGCCTCATCACGATAAGGAATACTGTGTTGGAGCAC
GTATCAACTAGCTCATTGAT

Product: cytochrome C assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPVFSILALLAYSLSLGLIIPSLVRKNSAYRRLALVSAVVALVCHAIALKNQIFDVGVGQNLTLLNIGSIVGLMICTIMT
IVASQGRGWFLLPIVYSFAMINLALASLLPGEFITHLEASPEIFIHIGLALFAYATLIIAALYALQLAWLDYQLKHKKLT
FNADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVYIVLLWGHYHEGWRGRRVIWFS
FAGAFLLTLAYFGSRLVQEIMVR

Sequences:

>Translated_263_residues
MPVFSILALLAYSLSLGLIIPSLVRKNSAYRRLALVSAVVALVCHAIALKNQIFDVGVGQNLTLLNIGSIVGLMICTIMT
IVASQGRGWFLLPIVYSFAMINLALASLLPGEFITHLEASPEIFIHIGLALFAYATLIIAALYALQLAWLDYQLKHKKLT
FNADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVYIVLLWGHYHEGWRGRRVIWFS
FAGAFLLTLAYFGSRLVQEIMVR
>Mature_262_residues
PVFSILALLAYSLSLGLIIPSLVRKNSAYRRLALVSAVVALVCHAIALKNQIFDVGVGQNLTLLNIGSIVGLMICTIMTI
VASQGRGWFLLPIVYSFAMINLALASLLPGEFITHLEASPEIFIHIGLALFAYATLIIAALYALQLAWLDYQLKHKKLTF
NADMPPLMSIERKMFHITQIGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVYIVLLWGHYHEGWRGRRVIWFSF
AGAFLLTLAYFGSRLVQEIMVR

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693174, Length=262, Percent_Identity=74.8091603053435, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29418; Mature: 29287

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFSILALLAYSLSLGLIIPSLVRKNSAYRRLALVSAVVALVCHAIALKNQIFDVGVGQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NLTLLNIGSIVGLMICTIMTIVASQGRGWFLLPIVYSFAMINLALASLLPGEFITHLEAS
CEEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PEIFIHIGLALFAYATLIIAALYALQLAWLDYQLKHKKLTFNADMPPLMSIERKMFHITQ
CHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHH
IGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVYIVLLWGHYHEGWRGRRVIWFS
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHH
FAGAFLLTLAYFGSRLVQEIMVR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVFSILALLAYSLSLGLIIPSLVRKNSAYRRLALVSAVVALVCHAIALKNQIFDVGVGQ
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NLTLLNIGSIVGLMICTIMTIVASQGRGWFLLPIVYSFAMINLALASLLPGEFITHLEAS
CEEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PEIFIHIGLALFAYATLIIAALYALQLAWLDYQLKHKKLTFNADMPPLMSIERKMFHITQ
CHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHH
IGVVLLTLTLCTGLLYMDNLFSKENVHKAVLSIMAWFVYIVLLWGHYHEGWRGRRVIWFS
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHH
FAGAFLLTLAYFGSRLVQEIMVR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]