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The map label for this gene is yfjD [H]

Identifier: 153950811

GI number: 153950811

Start: 3637676

End: 3638932

Strand: Direct

Name: yfjD [H]

Synonym: YpsIP31758_3232

Alternate gene names: 153950811

Gene position: 3637676-3638932 (Clockwise)

Preceding gene: 153949522

Following gene: 153948820

Centisome position: 77.02

GC content: 46.62

Gene sequence:

>1257_bases
TTGATCATTATCTTAGTCATTATGATCATCGTTTCGGCTTACTTCTCTGCATCAGAAACCGGCATGATGACACTTAACCG
GTATCGTCTGCGTCACTTATCCAAACAAGGCAACCGTGCCGCACGTCGGGTGGAAAAGCTCCTGAACCGCCCAGATCGCC
TGATAAGTTTGGTACTGATTGGCAATAATCTGGTTAACATACTGGCATCTGCGCTGGCGACGATTGTCGGTATTCGTTTA
TACGGTGATGCCGGAGTTGCCATCGCAACCGGGGTGCTAACTTTTGTGATCCTGATTTTTGCTGAAGTCCTGCCAAAAAC
TATCGCCGCCCTTTATCCTGAACGTGTCGCATTCCCTAGCAGTATGCTCCTGGCCCCCCTGCAAAAGATCATGCTGCCAC
TCGTGTGGCTACTGAATACCATTACTCGCGGGTTGATGCATTTATGTGGCATTAGAGGAAATGTGCGCAGCAGTGATGCG
ATGAGTAAAGATGAATTACGCACGATAGTGAGTGAGTCCCAATCAAAAATCTCTCGCCGCAATCAAGACATGTTGATTTC
AGTATTAGATCTGGAGAAAGTGACTGTCAGCGATATCATGGTGCCGCGTAATGAAGTCGTCGGTATCGATATTAATGATG
ATTGGAAGTCAATCATGCGCCAGCTTACACACTCGCCCCATGGTCGCATTGTGTTATATCGCCAGTCCTTGGATGACGCT
ATTGGCATGCTACGTGTGCGGGAAGCCTATCGGTTGATGACGGAGAAAAAGGAATTTAATAAAGAGAACCTACTGCGTGC
AGCCGATGAAATCTACTTTATCCCCGAAGGCACGCCACTCAATGTACAACTGGTGAAATTCCAACGTAATAAAAAGAAAG
TCGGCATGATTGTCGATGAATATGGTGATATTCAAGGTTTAGTGACAGTTGAAGATATTCTGGAGGAGATCGTGGGTGAT
TTTACCACCTCAATGTCCCCTACGCTTGCGGAAGAAGTTAATCCACAGAGCGACGGCTCGGTACTGATTGATGGCAGTGC
CAGCGTCCGCGAAGTGAACAAAGCCTTTAACTGGTCATTACCCGTCGATGCCCGCACCATCAATGGCATGTTGCTGGAAG
AGCTAGAAGAAATTCCGCAAGCACATATTCACGTCCGTCTTGGAAATTACCAAATTGAAGTACTTGATGTGCAGGAAAAT
ATGATTAAGCGGGTTAAAATTACCCCAATGACTTCCGCAGAACATTCGACCCTATAA

Upstream 100 bases:

>100_bases
GCTAGTGATTACCGTAACCACCTACGCAAGGCCCAACGGAACTGGCTGAGGCCTCATCACGATAAGGAATACTGTGTTGG
AGCACGTATCAACTAGCTCA

Downstream 100 bases:

>100_bases
ATAATTCTGTCTAAGCGATAGTCAGTTTAATAAAAAAGACGCTTTAATCAGCGCCTTTTATCATTCTCCTGCCTACTGAT
ACTGAGCACTAAATATGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRL
YGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVRSSDA
MSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDA
IGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGD
FTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQEN
MIKRVKITPMTSAEHSTL

Sequences:

>Translated_418_residues
MIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRL
YGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVRSSDA
MSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDA
IGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGD
FTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQEN
MIKRVKITPMTSAEHSTL
>Mature_418_residues
MIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASALATIVGIRL
YGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVRSSDA
MSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDA
IGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGD
FTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQEN
MIKRVKITPMTSAEHSTL

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=380, Percent_Identity=24.7368421052632, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI94681046, Length=340, Percent_Identity=23.2352941176471, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI145693175, Length=405, Percent_Identity=78.2716049382716, Blast_Score=664, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=433, Percent_Identity=24.0184757505774, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI87082033, Length=243, Percent_Identity=27.9835390946502, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786879, Length=237, Percent_Identity=25.3164556962025, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=25.6302521008403, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324512, Length=339, Percent_Identity=24.4837758112094, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46886; Mature: 46886

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLI
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHEEEEEE
GNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPS
CCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCH
SMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVRSSDAMSKDELRTIVSESQSKISRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NQDMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDA
CHHHEEEEHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCHHHH
IGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEECCCCCCCEEEEEEEECCCCHHCEEEEC
YGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSL
CCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCC
PVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL
CCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECHHHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLI
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHEEEEEE
GNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPS
CCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCH
SMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVRSSDAMSKDELRTIVSESQSKISRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NQDMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIVLYRQSLDDA
CHHHEEEEHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCHHHH
IGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEECCCCCCCEEEEEEEECCCCHHCEEEEC
YGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSL
CCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCC
PVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMTSAEHSTL
CCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECHHHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]