| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is fliI [H]
Identifier: 153949483
GI number: 153949483
Start: 2599034
End: 2600452
Strand: Direct
Name: fliI [H]
Synonym: YpsIP31758_2293
Alternate gene names: 153949483
Gene position: 2599034-2600452 (Clockwise)
Preceding gene: 153948419
Following gene: 153949104
Centisome position: 55.03
GC content: 53.77
Gene sequence:
>1419_bases ATGACCCCCCGCCTCAGCCGCTGGCTTACCTCTTTAGATAAATTCGAAGAGCGTATCAGCCAAACGACAACAATCCGCCG TTATGGCCGCTTGACCCGCGCCACCGGTTTAGTGCTGGAAGCCACTGGTCTGCAATTGCCGTTAGGGGCGACCTGTCTGA TTGAGCGCCATAATGGCGGTGAAGTGCAGGAAGTCGAAAGCGAAGTGGTTGGTTTTAACGGTCAGCATCTGTTTCTTATG CCTTTGGAAGATGTGGAAGGTATCGTCCCCGGTGCCAGAGTGTATGCCCGAGTCACCACCAGCGGCACGTCTGCCAGTAA ACAGTCAATTTCTAGTAAACAATCAATTCCCAGTAAACAATCATTCGCCAGTAAACAATTACCCCTTGGCCCCGAGTTAT TGGGCCGGGTATTGGATGGCAGTGCCAAACCGCTTGATGGCTTACCGGCACCTGAAACCGGTTATCGTGCACCACTGATT ACACCACCGATAAACCCTTTGCAACGCACCGCCATTGTCCAAGTCTTGGATGTGGGCGTGCGTACCATTAACGCCTTGTT GACGGTCGGGCGCGGCCAGCGGATGGGGCTGTTTGCTGGCTCTGGGGTTGGCAAAAGCGTACTGCTCGGCATGATGGCCC GTTACACACAGGCTGACGTGATCGTGGTTGGGCTGATTGGTGAGCGTGGCCGTGAAGTCAAAGATTTTATCGAAAATATT CTCGGGGCTGAAGGCCGTGCCCGTTCGGTGGTTATCGCCGCGCCAGCCGATGTGTCACCGTTGCTGCGTATGCAAGGTGC CGCCTATGCCACCCGTATTGCCGAAGATTTCCGCGATCGTGGTCAGCATGTGTTGCTAATTATGGACTCCCTAACCCGCT ATGCCATGGCGCAACGTGAAATCGCGCTGGCTATCGGCGAACCTCCCGCGACCAAAGGCTATCCGCCCTCCGTATTCGCC AAATTACCGGCACTGGTTGAACGGGCGGGTAACGGTGTTTCAGGCGGCGGCTCCATTACTGCATTTTATACCGTCCTCAC CGAAGGTGATGATCAACAAGACCCTATTGCTGACTCCGCGCGCGCCATCCTTGATGGGCATGTGGTGCTATCTCGCCGTT TAGCTGAATCCGGTCACTATCCAGCTATCGATATCGAAGCCTCTATCAGCCGTGCCATGACTTCATTAATCGATGATGAC CATTACAGCCGGGTGCGCCAATTTAAACAACTGCTTGCCAGCTATCAGCGTAACCGAGATTTAGTCAGTGTGGGGGCTTA CGCTGCGGGCAGTGATCCATTATTGGACAAGGCGATTGCCCTGTATCCGCAGATGGAAATTTTCTTGCAGCAAGGCATGT TTGAGCGCAGCAGTTTTGACGATGCCTGCCAGCATTTGAAGAGTTTATTTCCAGGATAA
Upstream 100 bases:
>100_bases CTGGCGGCTGTAAAGTCAGCGCGGAAGAAGGCGATTTGGATGCCAGTCTGGCGACCCGTTGGCATGAACTGTGCCGTCTG GCCGCGCCGGGGGAACTGTG
Downstream 100 bases:
>100_bases GGTTTTGTCAGGTTAAACGTTTATTTCCAGGCTAAGACCTTATTAAGGCTGAGCAGCCGGAAAGGATGACGCAAACCGCC GTGTCGCCCCTGTAACCAAT
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTPRLSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHNGGEVQEVESEVVGFNGQHLFLM PLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSFASKQLPLGPELLGRVLDGSAKPLDGLPAPETGYRAPLI TPPINPLQRTAIVQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENI LGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFA KLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDD HYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSFDDACQHLKSLFPG
Sequences:
>Translated_472_residues MTPRLSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHNGGEVQEVESEVVGFNGQHLFLM PLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSFASKQLPLGPELLGRVLDGSAKPLDGLPAPETGYRAPLI TPPINPLQRTAIVQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENI LGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFA KLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDD HYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSFDDACQHLKSLFPG >Mature_471_residues TPRLSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHNGGEVQEVESEVVGFNGQHLFLMP LEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSFASKQLPLGPELLGRVLDGSAKPLDGLPAPETGYRAPLIT PPINPLQRTAIVQVLDVGVRTINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAK LPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDH YSRVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSFDDACQHLKSLFPG
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. May be involved in a specialized protein export pathway that proceeds without signal peptide cleavage [
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=316, Percent_Identity=29.1139240506329, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI50345984, Length=356, Percent_Identity=26.9662921348315, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI4757810, Length=356, Percent_Identity=26.9662921348315, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI19913428, Length=415, Percent_Identity=27.4698795180723, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI19913426, Length=413, Percent_Identity=27.6029055690073, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI19913424, Length=316, Percent_Identity=28.1645569620253, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1788251, Length=459, Percent_Identity=80.3921568627451, Blast_Score=717, Evalue=0.0, Organism=Escherichia coli, GI1790170, Length=343, Percent_Identity=29.4460641399417, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1790172, Length=285, Percent_Identity=28.4210526315789, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1790217, Length=241, Percent_Identity=26.5560165975104, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI25144756, Length=312, Percent_Identity=28.8461538461538, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17570191, Length=374, Percent_Identity=28.6096256684492, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71988063, Length=353, Percent_Identity=28.328611898017, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71988080, Length=353, Percent_Identity=28.328611898017, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17510931, Length=370, Percent_Identity=25.6756756756757, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17565854, Length=324, Percent_Identity=28.0864197530864, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71988074, Length=341, Percent_Identity=26.9794721407625, Blast_Score=101, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6322581, Length=309, Percent_Identity=29.4498381877023, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6319370, Length=346, Percent_Identity=27.1676300578035, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6319603, Length=384, Percent_Identity=28.6458333333333, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320016, Length=280, Percent_Identity=29.2857142857143, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24638766, Length=311, Percent_Identity=28.9389067524116, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24658560, Length=366, Percent_Identity=28.4153005464481, Blast_Score=122, Evalue=8e-28, Organism=Drosophila melanogaster, GI28574560, Length=338, Percent_Identity=28.1065088757396, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI281361666, Length=416, Percent_Identity=27.1634615384615, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24646341, Length=416, Percent_Identity=27.1634615384615, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI17136796, Length=416, Percent_Identity=27.1634615384615, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24583988, Length=315, Percent_Identity=28.2539682539683, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24583986, Length=315, Percent_Identity=28.2539682539683, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24583984, Length=315, Percent_Identity=28.2539682539683, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI20129479, Length=314, Percent_Identity=28.343949044586, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24583992, Length=319, Percent_Identity=27.8996865203762, Blast_Score=105, Evalue=6e-23,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - InterPro: IPR020005 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 50939; Mature: 50808
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRLSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHNGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCC EVQEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQ CHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHH SFASKQLPLGPELLGRVLDGSAKPLDGLPAPETGYRAPLITPPINPLQRTAIVQVLDVGV HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RTINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENI HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH LGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQRE HCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH IALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSA EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHH RAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRD HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC LVSVGAYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSFDDACQHLKSLFPG EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TPRLSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGLQLPLGATCLIERHNGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCC EVQEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQ CHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHH SFASKQLPLGPELLGRVLDGSAKPLDGLPAPETGYRAPLITPPINPLQRTAIVQVLDVGV HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RTINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENI HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH LGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQRE HCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH IALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSA EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHH RAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRD HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC LVSVGAYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSFDDACQHLKSLFPG EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]