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The map label for this gene is fliJ [H]

Identifier: 153949104

GI number: 153949104

Start: 2600563

End: 2601009

Strand: Direct

Name: fliJ [H]

Synonym: YpsIP31758_2294

Alternate gene names: 153949104

Gene position: 2600563-2601009 (Clockwise)

Preceding gene: 153949483

Following gene: 153947302

Centisome position: 55.06

GC content: 48.1

Gene sequence:

>447_bases
ATGAAAAGTCAGTCACCTCTCGTCACCTTGTGCGATCTGGCCCAGAAAGCCGTCGAACAGGCCAGTACTCAACTGGGACA
CGTGCGTCAGTCCTATCAGAATGCTGAGCAGCAACTGACTATGTTGCTGACTTATCAGGATGAATACCGGGAGCGGTTGA
ATGACACGCTGTGCAATGGGATGGCTTCATCCAGTTGGCAAAATTATCAGCAGTTTATTCAAACGCTGGAACAAGCTATC
GATCAACACCGCAAACAACTGGCTCAATGGAGTATCAAAGTTGAGCAGGCAGTGAAGTATTGGCAAGAGAAACAGCAGCG
GTTAAACGCGTTTGAAACCTTGCAAGAGCGGGCAGAAACCACTCAGCGCCAGCAAGAGAACCGTTTAGATCAAAAATTGA
TGGATGAGTTCGCTCAGCGCGCCTCACAAAGGAGTCTTAATTTATGA

Upstream 100 bases:

>100_bases
GGTTAAACGTTTATTTCCAGGCTAAGACCTTATTAAGGCTGAGCAGCCGGAAAGGATGACGCAAACCGCCGTGTCGCCCC
TGTAACCAATGAGGAATTCG

Downstream 100 bases:

>100_bases
ATCTGTCCCTATTGCCCGCTGCGGCGACCCCGAGTGAAAGCGAAGGTGTTTCGTCTTCTTCCTCTATTGCAACGCTGTTT
AGCGATACCGGTATGCCAAC

Product: flagellar biosynthesis chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKSQSPLVTLCDLAQKAVEQASTQLGHVRQSYQNAEQQLTMLLTYQDEYRERLNDTLCNGMASSSWQNYQQFIQTLEQAI
DQHRKQLAQWSIKVEQAVKYWQEKQQRLNAFETLQERAETTQRQQENRLDQKLMDEFAQRASQRSLNL

Sequences:

>Translated_148_residues
MKSQSPLVTLCDLAQKAVEQASTQLGHVRQSYQNAEQQLTMLLTYQDEYRERLNDTLCNGMASSSWQNYQQFIQTLEQAI
DQHRKQLAQWSIKVEQAVKYWQEKQQRLNAFETLQERAETTQRQQENRLDQKLMDEFAQRASQRSLNL
>Mature_148_residues
MKSQSPLVTLCDLAQKAVEQASTQLGHVRQSYQNAEQQLTMLLTYQDEYRERLNDTLCNGMASSSWQNYQQFIQTLEQAI
DQHRKQLAQWSIKVEQAVKYWQEKQQRLNAFETLQERAETTQRQQENRLDQKLMDEFAQRASQRSLNL

Specific function: Flagellar protein that affects chemotactic events [H]

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliJ family [H]

Homologues:

Organism=Escherichia coli, GI1788252, Length=144, Percent_Identity=56.9444444444444, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018006
- InterPro:   IPR012823 [H]

Pfam domain/function: PF02050 FliJ [H]

EC number: NA

Molecular weight: Translated: 17529; Mature: 17529

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQSPLVTLCDLAQKAVEQASTQLGHVRQSYQNAEQQLTMLLTYQDEYRERLNDTLCNG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MASSSWQNYQQFIQTLEQAIDQHRKQLAQWSIKVEQAVKYWQEKQQRLNAFETLQERAET
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQRQQENRLDQKLMDEFAQRASQRSLNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSQSPLVTLCDLAQKAVEQASTQLGHVRQSYQNAEQQLTMLLTYQDEYRERLNDTLCNG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MASSSWQNYQQFIQTLEQAIDQHRKQLAQWSIKVEQAVKYWQEKQQRLNAFETLQERAET
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQRQQENRLDQKLMDEFAQRASQRSLNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]