| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153949424
Identifier: 153949424
GI number: 153949424
Start: 3716515
End: 3716781
Strand: Reverse
Name: 153949424
Synonym: YpsIP31758_3306
Alternate gene names: NA
Gene position: 3716781-3716515 (Counterclockwise)
Preceding gene: 153948269
Following gene: 153949295
Centisome position: 78.69
GC content: 40.82
Gene sequence:
>267_bases GTGGGTATCATACCTACAAGTAGTATTGAGTCAATTAGTTATAGGTGTAATACCCACCAATTCTTATACGTGAAAAACAC GGAAAAGGGCGATCATAATGATCGTCCATGCCTTGAATTTATTGGTTTTTTTATCCATTTTGCGCAATATCTCGCAATCG GGAATTATTTTTTAGGTATCGCGAATGTTTATCGTCGTGGTAACAGGATCCTTGCACTCTCGCAGGTCTGTTTACTGATG CGGCCGGGTCAGTACGTAGCCAAATAG
Upstream 100 bases:
>100_bases CCACTATTCGTTTTTCTGCCTCCTCTGATTTGCCATCCTGCATCCTCTAAGCGTTTTATTAATTCGCCACTCTCCATGTG AACCCCCTGGTGAGCTACTT
Downstream 100 bases:
>100_bases TTTACATTATTCAAATCTTCATCACTGTGCGGTATTAACCGCACTCACGCCAATGGCTGTAAAACTCACGCTAATGGCTG TAAAACTCATGCCAATAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MGIIPTSSIESISYRCNTHQFLYVKNTEKGDHNDRPCLEFIGFFIHFAQYLAIGNYFLGIANVYRRGNRILALSQVCLLM RPGQYVAK
Sequences:
>Translated_88_residues MGIIPTSSIESISYRCNTHQFLYVKNTEKGDHNDRPCLEFIGFFIHFAQYLAIGNYFLGIANVYRRGNRILALSQVCLLM RPGQYVAK >Mature_87_residues GIIPTSSIESISYRCNTHQFLYVKNTEKGDHNDRPCLEFIGFFIHFAQYLAIGNYFLGIANVYRRGNRILALSQVCLLMR PGQYVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10105; Mature: 9974
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIIPTSSIESISYRCNTHQFLYVKNTEKGDHNDRPCLEFIGFFIHFAQYLAIGNYFLGI CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ANVYRRGNRILALSQVCLLMRPGQYVAK HHHHHCCCEEEHHHHHHHHCCCCHHHCC >Mature Secondary Structure GIIPTSSIESISYRCNTHQFLYVKNTEKGDHNDRPCLEFIGFFIHFAQYLAIGNYFLGI CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ANVYRRGNRILALSQVCLLMRPGQYVAK HHHHHCCCEEEHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA