| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949260
Identifier: 153949260
GI number: 153949260
Start: 4551894
End: 4552370
Strand: Reverse
Name: 153949260
Synonym: YpsIP31758_4042
Alternate gene names: NA
Gene position: 4552370-4551894 (Counterclockwise)
Preceding gene: 153948059
Following gene: 153949598
Centisome position: 96.38
GC content: 32.08
Gene sequence:
>477_bases ATGATAAAAAAAGAAAATAATAAATGGATTTTTACCATAAGTGGATTGTTTATTTTTTGCATTATAACGTATTACTTATG GATGAAATTCAGGCCTGTAGAGGTTATTGGCGTGTACGGACATAGCGATATAATAATCAAAAATCCGCCGATTACAGATA AGGGTAAGATAACTTGGTGGCAAGACAATAAAGATATCATTCAGGCGAAGTATGGCACTCCTAAATATGATATTAATGGA ACCTTCTCTGTAACTATTTGGGATTTTGGTGATGGTTATGAAAATTACAGAGAAGGTTCACACTTCGAAATGCCCGCTCC AGAATTCTATTGCTTTGATGATGCAAAAATAAATTGTTTGGATAAAGAAAATGAGATAGTAACAATTTATAAAACATCAG GAGGGATTATAAAATATGTTACAAATGATACTTCGTATAACCAAAGAGAAGACGGGGAAATAGTAAAGGAATATTGA
Upstream 100 bases:
>100_bases TTCCGCCTCTGGTTTGTCCTCCAGCGATACAATCAGTTTGGATATAAACCATTTATGACTGATATGAAAGCGACGGTGGA AATCAAAGGGAGAAAATAAC
Downstream 100 bases:
>100_bases GAATTAGCAGAGCAGTCTCTAAGAGAAAATTAATCCCTAAATTGCCCCTATATAGTTTCAGGGGCTGCCCGTTGCGTTTA AACGCCGGTCTAAGCATTAC
Product: entero membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MIKKENNKWIFTISGLFIFCIITYYLWMKFRPVEVIGVYGHSDIIIKNPPITDKGKITWWQDNKDIIQAKYGTPKYDING TFSVTIWDFGDGYENYREGSHFEMPAPEFYCFDDAKINCLDKENEIVTIYKTSGGIIKYVTNDTSYNQREDGEIVKEY
Sequences:
>Translated_158_residues MIKKENNKWIFTISGLFIFCIITYYLWMKFRPVEVIGVYGHSDIIIKNPPITDKGKITWWQDNKDIIQAKYGTPKYDING TFSVTIWDFGDGYENYREGSHFEMPAPEFYCFDDAKINCLDKENEIVTIYKTSGGIIKYVTNDTSYNQREDGEIVKEY >Mature_158_residues MIKKENNKWIFTISGLFIFCIITYYLWMKFRPVEVIGVYGHSDIIIKNPPITDKGKITWWQDNKDIIQAKYGTPKYDING TFSVTIWDFGDGYENYREGSHFEMPAPEFYCFDDAKINCLDKENEIVTIYKTSGGIIKYVTNDTSYNQREDGEIVKEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18565; Mature: 18565
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKENNKWIFTISGLFIFCIITYYLWMKFRPVEVIGVYGHSDIIIKNPPITDKGKITWW CCEECCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCEEEE QDNKDIIQAKYGTPKYDINGTFSVTIWDFGDGYENYREGSHFEMPAPEFYCFDDAKINCL ECCCEEEEEECCCCEEECCCEEEEEEEECCCCHHHHCCCCCCCCCCCCEEEECCCEEEEE DKENEIVTIYKTSGGIIKYVTNDTSYNQREDGEIVKEY CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEECC >Mature Secondary Structure MIKKENNKWIFTISGLFIFCIITYYLWMKFRPVEVIGVYGHSDIIIKNPPITDKGKITWW CCEECCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCEEEE QDNKDIIQAKYGTPKYDINGTFSVTIWDFGDGYENYREGSHFEMPAPEFYCFDDAKINCL ECCCEEEEEECCCCEEECCCEEEEEEEECCCCHHHHCCCCCCCCCCCCEEEECCCEEEEE DKENEIVTIYKTSGGIIKYVTNDTSYNQREDGEIVKEY CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA