| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yhiQ [C]
Identifier: 153949598
GI number: 153949598
Start: 4548808
End: 4549578
Strand: Reverse
Name: yhiQ [C]
Synonym: YpsIP31758_4038
Alternate gene names: 153949598
Gene position: 4549578-4548808 (Counterclockwise)
Preceding gene: 153949260
Following gene: 153949148
Centisome position: 96.32
GC content: 57.72
Gene sequence:
>771_bases GTGTCACACGTCAGTATTTGTTTATTATCTGAAGCAGGCGCCGATCCCGGCGCCTTATCTATTCTGGCTGATCGCTGGGG GCTAGTCTCTGATGATCAGGCGGTGATGGCGTTGGTGCTGACCGCTGAACGGCTTGAACTGCGTAAGCGGGATGAGCCGA AACTTGGCGGCATCTATGTGGATTTCGTCTCTGGCACGCAGGCGCATCGGCGTAAATTTGGTGGTGGCCGTGGCGAAGCC GTCGCGAAAGCCGTGGGCATCAAAAAAGGCTATCTCCCACGGGTGGTGGATGCCACCGCAGGCCTTGGGCGCGATGCCTT TGTTCTGGCGGCGTTAGGCTGCCAGGTGCAGATGCTGGAACGTAACCCGGTGGTCGCTGCATTACTGGATGATGGTTTGC GCCGGGGCTATCTGGATGCTGAAATCGGTCCGTGGCTACGTGAACGTCTGACGTTGCTACATGCCTCCAGTCTGACCGCG TTGGTGGCGATTGAACCGCGCCCAGAGGTGGTTTATCTCGATCCGATGTACCCGCACCGGCAAAAAAGTGCGTTGGTTAA AAAAGAGATGCGGGTATTTCAATCATTGGTGGGGGCCGATAATGATGCTGATGGTTTGTTAGCCCCCGCCCGTGCGTTGG CCACCAAGCGAGTGGTGGTGAAACGCCCGGATTATGCTGAGCCATTGGCTGGCGTGGCCGCTCAGGCGGCGGTTGTGACC AAGAGCCACCGTTTTGACATATACCCTTCATCGGTGACGCCGCCGCGTTAG
Upstream 100 bases:
>100_bases AATGTAGGTTAAAATTAAGGTTTTTACATAAATGCTTAAAAAAACTATTAGAATCAAAGGTAAAAATGTAATGCGCCATT ACGGTATTAAGGGCTAATAC
Downstream 100 bases:
>100_bases CGGCATTTTCTCACCCGAATCGCTGAAATTTTAATGAGTGATTCGGGTAAGTAGATATAAATATTTATGCCGTCAGTGAC GTACTTAAAATAAAGTCATT
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSHVSICLLSEAGADPGALSILADRWGLVSDDQAVMALVLTAERLELRKRDEPKLGGIYVDFVSGTQAHRRKFGGGRGEA VAKAVGIKKGYLPRVVDATAGLGRDAFVLAALGCQVQMLERNPVVAALLDDGLRRGYLDAEIGPWLRERLTLLHASSLTA LVAIEPRPEVVYLDPMYPHRQKSALVKKEMRVFQSLVGADNDADGLLAPARALATKRVVVKRPDYAEPLAGVAAQAAVVT KSHRFDIYPSSVTPPR
Sequences:
>Translated_256_residues MSHVSICLLSEAGADPGALSILADRWGLVSDDQAVMALVLTAERLELRKRDEPKLGGIYVDFVSGTQAHRRKFGGGRGEA VAKAVGIKKGYLPRVVDATAGLGRDAFVLAALGCQVQMLERNPVVAALLDDGLRRGYLDAEIGPWLRERLTLLHASSLTA LVAIEPRPEVVYLDPMYPHRQKSALVKKEMRVFQSLVGADNDADGLLAPARALATKRVVVKRPDYAEPLAGVAAQAAVVT KSHRFDIYPSSVTPPR >Mature_255_residues SHVSICLLSEAGADPGALSILADRWGLVSDDQAVMALVLTAERLELRKRDEPKLGGIYVDFVSGTQAHRRKFGGGRGEAV AKAVGIKKGYLPRVVDATAGLGRDAFVLAALGCQVQMLERNPVVAALLDDGLRRGYLDAEIGPWLRERLTLLHASSLTAL VAIEPRPEVVYLDPMYPHRQKSALVKKEMRVFQSLVGADNDADGLLAPARALATKRVVVKRPDYAEPLAGVAAQAAVVTK SHRFDIYPSSVTPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family [H]
Homologues:
Organism=Escherichia coli, GI1789912, Length=248, Percent_Identity=78.2258064516129, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 27595; Mature: 27464
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVSICLLSEAGADPGALSILADRWGLVSDDQAVMALVLTAERLELRKRDEPKLGGIYV CCCEEEEEEECCCCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE DFVSGTQAHRRKFGGGRGEAVAKAVGIKKGYLPRVVDATAGLGRDAFVLAALGCQVQMLE EECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHCCEEEEEC RNPVVAALLDDGLRRGYLDAEIGPWLRERLTLLHASSLTALVAIEPRPEVVYLDPMYPHR CCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCH QKSALVKKEMRVFQSLVGADNDADGLLAPARALATKRVVVKRPDYAEPLAGVAAQAAVVT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHEE KSHRFDIYPSSVTPPR CCCEEEECCCCCCCCC >Mature Secondary Structure SHVSICLLSEAGADPGALSILADRWGLVSDDQAVMALVLTAERLELRKRDEPKLGGIYV CCEEEEEEECCCCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE DFVSGTQAHRRKFGGGRGEAVAKAVGIKKGYLPRVVDATAGLGRDAFVLAALGCQVQMLE EECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHCCEEEEEC RNPVVAALLDDGLRRGYLDAEIGPWLRERLTLLHASSLTALVAIEPRPEVVYLDPMYPHR CCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCH QKSALVKKEMRVFQSLVGADNDADGLLAPARALATKRVVVKRPDYAEPLAGVAAQAAVVT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHEE KSHRFDIYPSSVTPPR CCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA