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The map label for this gene is ydgK [H]

Identifier: 153949168

GI number: 153949168

Start: 2196043

End: 2196486

Strand: Direct

Name: ydgK [H]

Synonym: YpsIP31758_1893

Alternate gene names: 153949168

Gene position: 2196043-2196486 (Clockwise)

Preceding gene: 153950247

Following gene: 153949628

Centisome position: 46.49

GC content: 46.62

Gene sequence:

>444_bases
ATGTCTCAACCTCAAGAATATCAACGCATTGGCGGCTGGTTATTAGCCCCACTGGCCTATCTTATCGTAACACTGCTCAG
CGCCAGCCTGATGCTCGTCTTGTACGCCATGGCGATCACGACACCGGCATCCAGAGAGTATTTGGTGACCAACACGCAAG
CTTTTACGTTACAATGGTACTTCTCCGTAGTAACAACGCTGGTCATGTGGCTTTACACGTTGTGGATTATTTGGCTATTT
TGTAGCCGTTCCCGTCGTTTTCCTAAGCTGTTCATTCTGTGGTTACTGCTTACGGTGTTACTGGCGTTGAAGGCATTTGC
TTTTTCACCAATCTCTGATGAAATTGCATTAAAAACACTCGGGTGGCCGCTGCTAGCTGCAGCTATTTTTGTTCCTTACA
TCAAACGTTCACAGCGTGTAAAACACACTTTTACCGAGCGTTGA

Upstream 100 bases:

>100_bases
AATGACCAAGAGCGCATTCGCGGGTTAAGCCAGGAGAATAGAAAGAGGGTATGATATCTTATTACTGAATACCTCTAATG
AGCAGATTAAAAGGTTTATT

Downstream 100 bases:

>100_bases
AGTGATTGCGCACGATTTCCCCCTAAAATAAAGGGAAAATCGCAATAACCCTGCATTTCATCTGTTGTCGTCGGGCCGTC
AATTTTGGATAATAGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSQPQEYQRIGGWLLAPLAYLIVTLLSASLMLVLYAMAITTPASREYLVTNTQAFTLQWYFSVVTTLVMWLYTLWIIWLF
CSRSRRFPKLFILWLLLTVLLALKAFAFSPISDEIALKTLGWPLLAAAIFVPYIKRSQRVKHTFTER

Sequences:

>Translated_147_residues
MSQPQEYQRIGGWLLAPLAYLIVTLLSASLMLVLYAMAITTPASREYLVTNTQAFTLQWYFSVVTTLVMWLYTLWIIWLF
CSRSRRFPKLFILWLLLTVLLALKAFAFSPISDEIALKTLGWPLLAAAIFVPYIKRSQRVKHTFTER
>Mature_146_residues
SQPQEYQRIGGWLLAPLAYLIVTLLSASLMLVLYAMAITTPASREYLVTNTQAFTLQWYFSVVTTLVMWLYTLWIIWLFC
SRSRRFPKLFILWLLLTVLLALKAFAFSPISDEIALKTLGWPLLAAAIFVPYIKRSQRVKHTFTER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0481 [H]

Homologues:

Organism=Escherichia coli, GI87081948, Length=141, Percent_Identity=52.4822695035461, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019690 [H]

Pfam domain/function: PF10754 DUF2569 [H]

EC number: NA

Molecular weight: Translated: 17069; Mature: 16937

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPQEYQRIGGWLLAPLAYLIVTLLSASLMLVLYAMAITTPASREYLVTNTQAFTLQWY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
FSVVTTLVMWLYTLWIIWLFCSRSRRFPKLFILWLLLTVLLALKAFAFSPISDEIALKTL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GWPLLAAAIFVPYIKRSQRVKHTFTER
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQPQEYQRIGGWLLAPLAYLIVTLLSASLMLVLYAMAITTPASREYLVTNTQAFTLQWY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
FSVVTTLVMWLYTLWIIWLFCSRSRRFPKLFILWLLLTVLLALKAFAFSPISDEIALKTL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GWPLLAAAIFVPYIKRSQRVKHTFTER
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]