| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948831
Identifier: 153948831
GI number: 153948831
Start: 60547
End: 61440
Strand: Reverse
Name: 153948831
Synonym: YpsIP31758_0053
Alternate gene names: NA
Gene position: 61440-60547 (Counterclockwise)
Preceding gene: 153948267
Following gene: 153947799
Centisome position: 1.3
GC content: 36.58
Gene sequence:
>894_bases GTGAAATTACCAGAACATAGATATTACACATTAGAAAAAGCGGCAAAGACTGTAGGGTGTAATGTATCAGACCTAATTCA TTTTGCCGCTATTGGTGTCCTGCAAATCTGTATAAAAATGCCTATGATTGATTTCTTTTTTAACCTGAAAGATAAGGGTG AAGAAGATGCTGATCCAGAATTACTAAAAGTAGAGTCAACTAGTATATTGTTGATAAATGAAGTCGAGTTACAACAAGAA AAAACAAATAAAGACAAGATTCCCGACATCCATTGGCTTAGATTCTCATATAAATCTGATTATTTTTCTATTACTGAGAG ATATGAAGTTAATAAGAGAGAGAAAGATATAGAAGAATGGAGTGGCATGTTGGCTATTCCACAAGAATTTATTGAACATG AAGAACAAGAGCTATCGCTATGGGATGATTGGGATATTTCCATCTGTGAACTATACCCACCTCGATGCGATATGGTATCC CATGATCCCGAATACCTAGTTGGCGATTTTTATATTGATGGTTGGTATGAAATAAATCGTAGGGATATGTATATAACCAG CTATGAGCTAGGTTTACTTTCTACTGGTGGGAAAAATATAGATGCTGAAGACAATACGAGCGAAAAACTCAAGTCAGAGC CCGCTAATGTTGTCAGCCTACAGGTAAACAAAAGATCAGAAAGACACGCGGCGAATAGAGAAAGCTTACTTAAGTCTGCC ATATATATACTAAGTCATTATCCTGAAGAATGCCGTGGTGAAAGAAAGGAGATTAGCCCTGAGAAATGGCGAGACTGCTT ACTTAAGCGAAAAAATGAAGTTCCTCCATTAATGATCACAAATGAAGAAGTAATTCTAAAACACTTACGAACAGCCGTTA ATGGGAAAGGGTAG
Upstream 100 bases:
>100_bases ATAAAAGAACAGATTGAGCCTAGCCTGACGGGGCGAAAAGCGGAAAGCCTTACCGCCTGGCTCAATCTACTATTTAAGGT ATAGCGCAAAAGGTGACGCT
Downstream 100 bases:
>100_bases AGTTAACTTATTGTAAGGGTACAGTGAGTTAACTCTCCCTTATGCTTTCATGTTTACAGAATTAATCTTGCCCGTAACGA CGCATAAACCATCAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKLPEHRYYTLEKAAKTVGCNVSDLIHFAAIGVLQICIKMPMIDFFFNLKDKGEEDADPELLKVESTSILLINEVELQQE KTNKDKIPDIHWLRFSYKSDYFSITERYEVNKREKDIEEWSGMLAIPQEFIEHEEQELSLWDDWDISICELYPPRCDMVS HDPEYLVGDFYIDGWYEINRRDMYITSYELGLLSTGGKNIDAEDNTSEKLKSEPANVVSLQVNKRSERHAANRESLLKSA IYILSHYPEECRGERKEISPEKWRDCLLKRKNEVPPLMITNEEVILKHLRTAVNGKG
Sequences:
>Translated_297_residues MKLPEHRYYTLEKAAKTVGCNVSDLIHFAAIGVLQICIKMPMIDFFFNLKDKGEEDADPELLKVESTSILLINEVELQQE KTNKDKIPDIHWLRFSYKSDYFSITERYEVNKREKDIEEWSGMLAIPQEFIEHEEQELSLWDDWDISICELYPPRCDMVS HDPEYLVGDFYIDGWYEINRRDMYITSYELGLLSTGGKNIDAEDNTSEKLKSEPANVVSLQVNKRSERHAANRESLLKSA IYILSHYPEECRGERKEISPEKWRDCLLKRKNEVPPLMITNEEVILKHLRTAVNGKG >Mature_297_residues MKLPEHRYYTLEKAAKTVGCNVSDLIHFAAIGVLQICIKMPMIDFFFNLKDKGEEDADPELLKVESTSILLINEVELQQE KTNKDKIPDIHWLRFSYKSDYFSITERYEVNKREKDIEEWSGMLAIPQEFIEHEEQELSLWDDWDISICELYPPRCDMVS HDPEYLVGDFYIDGWYEINRRDMYITSYELGLLSTGGKNIDAEDNTSEKLKSEPANVVSLQVNKRSERHAANRESLLKSA IYILSHYPEECRGERKEISPEKWRDCLLKRKNEVPPLMITNEEVILKHLRTAVNGKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34742; Mature: 34742
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPEHRYYTLEKAAKTVGCNVSDLIHFAAIGVLQICIKMPMIDFFFNLKDKGEEDADPE CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LLKVESTSILLINEVELQQEKTNKDKIPDIHWLRFSYKSDYFSITERYEVNKREKDIEEW EEEECCCEEEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCEEHHHHHHCCCHHHHHHHH SGMLAIPQEFIEHEEQELSLWDDWDISICELYPPRCDMVSHDPEYLVGDFYIDGWYEINR CCEEECCHHHHCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECEEEECC RDMYITSYELGLLSTGGKNIDAEDNTSEKLKSEPANVVSLQVNKRSERHAANRESLLKSA CEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH IYILSHYPEECRGERKEISPEKWRDCLLKRKNEVPPLMITNEEVILKHLRTAVNGKG HHHHHCCCHHHCCCHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLPEHRYYTLEKAAKTVGCNVSDLIHFAAIGVLQICIKMPMIDFFFNLKDKGEEDADPE CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LLKVESTSILLINEVELQQEKTNKDKIPDIHWLRFSYKSDYFSITERYEVNKREKDIEEW EEEECCCEEEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCEEHHHHHHCCCHHHHHHHH SGMLAIPQEFIEHEEQELSLWDDWDISICELYPPRCDMVSHDPEYLVGDFYIDGWYEINR CCEEECCHHHHCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECEEEECC RDMYITSYELGLLSTGGKNIDAEDNTSEKLKSEPANVVSLQVNKRSERHAANRESLLKSA CEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH IYILSHYPEECRGERKEISPEKWRDCLLKRKNEVPPLMITNEEVILKHLRTAVNGKG HHHHHCCCHHHCCCHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA