| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948827
Identifier: 153948827
GI number: 153948827
Start: 3153771
End: 3154628
Strand: Reverse
Name: 153948827
Synonym: YpsIP31758_2789
Alternate gene names: NA
Gene position: 3154628-3153771 (Counterclockwise)
Preceding gene: 153947295
Following gene: 153948370
Centisome position: 66.79
GC content: 46.5
Gene sequence:
>858_bases GTGACTAGTTTGCCAATAACTGCTAAGCAATTCAAACCCTCCATTGCTGAGGAGCCTAAGATTGCCAGGCTAAAACAGCT TGATCGGCATAGTTTGGAACAATTAATCCGTGGTGACATCTTGGCAATTCGTATTCCCAATTACTGCCCTGAAAAAACCG CCGCATCATTAAATCAATACATTAATCAAACCGCAAAGCTGGATGAATACACCCATGAGGTCTATGAAAAAGACCAGGTG GTACAAAATTTTTACGGTGTCCACCGCTGGGGAACGCCATTCAATACGACCTACGGTAAAGCTGAAAACGAGAGTGCAAA GCAGAAGTATTATCGTGATGCAGCCCAGATGCGCATACTGATTGACCGTCTTTGCGCTCCAGATTTGCCGCCAATTCAAG CGTTAATCGAAAATATTAAACAGCACTGGCCAGAGGGCGCAGTGACTGCTTCTTTTGAAGGGAAACCGATGTTTTCCGGT ATCATTCGCGTGATGTTTCCTGAAACGGCGCATCTATCCGAAACGGTTCCACATGTGGATTGCCTGCCATTTTCCGTTGC CGAGTTAGAGCATCAATTCAGCGCTAATATTTATATTGATACACCACCTGTTGGCGGTGAATTAGTCATCTGGGATACTG AGGCCTTTTCCTTCGCCGAAGTCGCGCTATTTGAGGGAGGAAAACTGCCCGAAGAGCGTTTGCAGCGGCCTCTGCGCATT CAACCACAGAAAAATGAGCTGGTGATCATCAATACCCGCCGCCCTCACGCCATTTGCGGGTTTGATTCAGGCAAACGAAT CAGCATGCAGTCATTTATAGGTTACAACACGAACCAGCCGTTCTATTTCTGGTGTTAA
Upstream 100 bases:
>100_bases CTTCTCATAAATAAGACAACATCTCATCATGTTGTCCCTTAGCAGAATTATCGTGTAATTTAAAATGATAGGGTTTCTAA ATTAATGGAGCCAAATCATT
Downstream 100 bases:
>100_bases TGACTTCAAAATGAGAGCTTTTTATGACTCCTGAAGAGTTTCGCCGCCATGGCTATGCCATGATCGACCTGATTGCTGAT TACCGACAAAATATCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQV VQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGAVTASFEGKPMFSG IIRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVIWDTEAFSFAEVALFEGGKLPEERLQRPLRI QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
Sequences:
>Translated_285_residues MTSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQV VQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGAVTASFEGKPMFSG IIRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVIWDTEAFSFAEVALFEGGKLPEERLQRPLRI QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC >Mature_284_residues TSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQVV QNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGAVTASFEGKPMFSGI IRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVIWDTEAFSFAEVALFEGGKLPEERLQRPLRIQ PQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32602; Mature: 32470
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQY CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH INQTAKLDEYTHEVYEKDQVVQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IDRLCAPDLPPIQALIENIKQHWPEGAVTASFEGKPMFSGIIRVMFPETAHLSETVPHVD HHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCC CLPFSVAELEHQFSANIYIDTPPVGGELVIWDTEAFSFAEVALFEGGKLPEERLQRPLRI CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHCCCEEC QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC CCCCCCEEEEECCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEC >Mature Secondary Structure TSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQY CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH INQTAKLDEYTHEVYEKDQVVQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IDRLCAPDLPPIQALIENIKQHWPEGAVTASFEGKPMFSGIIRVMFPETAHLSETVPHVD HHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCC CLPFSVAELEHQFSANIYIDTPPVGGELVIWDTEAFSFAEVALFEGGKLPEERLQRPLRI CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHCCCEEC QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC CCCCCCEEEEECCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA