| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948811
Identifier: 153948811
GI number: 153948811
Start: 1743558
End: 1744496
Strand: Direct
Name: 153948811
Synonym: YpsIP31758_1502
Alternate gene names: NA
Gene position: 1743558-1744496 (Clockwise)
Preceding gene: 153947959
Following gene: 153949329
Centisome position: 36.91
GC content: 46.65
Gene sequence:
>939_bases ATGACAACACTCAGTGAGCAAGCTCCTCCCATGCTGCAGGATACTCAGCTTGAACAGCAAATCTTGCGCCGCTCGATTTT TTATACCTTGATTATTGCAGTAATGGGGATCGTCTTCGGTATTGTATGTGGCTCAATGTCGATTGTCTTTGATGGTATGT TCTCCGCGCTGGATGCGGGGATGTGCAGTTTATCTCTATTGGTCTCTCGGCTACTTGGTCAACCGCATAGCCGACGTTTT CAATATGGTTTTTGGCATGTGGAACCGTTGGTTCTGGCCTTTAATGGCAGCTTATTAGCCCTCCTTTGTCTTTACGCTTT TGTGAATGCGATAAAAGGTATTTTTGATGGCGGGCGGGAATTGGAGCTCGGTTGGGCCATTGTCTACACATTGGCTGTCA GTATTTTTTGTTTCACCATTTATTTAAAACAGCGGCGCTTGAATAAACGGGTGAAATCCGAGCTTATTGCATTGGATACG AAGAGTTGGTTCATGTCCGCTTGTATCAGTACGGCGCTGTTAGTTGCATTTTTACTCTCATGGGGTATGGAAGGTACGCG CTATGAACACCTTATTGTTTATGCTGACCCCATTGTACTGGCGCTGTTAACGTTAGTATTAATTTCGGTCCCAATTAAAA CAGTGATTGCGGCAGTGCGTGAAGTTTTACAAATGACGCCCGATACACTGGATACGGCGATTGAGACCTTGATGGAACGC CTGGTGGATAAATATAAATTTGTTGATTACTCGCATTATGCCACCCGCGCTGGCCGTGGTTTATTTATCGAGATCCACGT GGTGATCCCGCCAGAAATGGAGACCCGCGGGGTTCATCATTTCGATACTATCCGCGATGAGATCGCCCATGAGATTGGTG AGTCTGGGCCTCACCGCTGGTTAACCATCTCCTTTACGCGTGATGCCAAGTGGTTGTAG
Upstream 100 bases:
>100_bases TTGGCATGTGATCTTATTAAATTGAGTTGATGTAATAATATTCCTAATATGAGAGTTTACTCATCAAGCTAAATTAAAAT CAAAAAAACAGGTTGTACAC
Downstream 100 bases:
>100_bases CTGGCCATAGCCATTTGGTTTTTTATCGTGTTTTTATCATCCCCCAGCCGTGATTTGCTGGGGGTTTTTAATGGTTACTA AGGTAAGTAAGTGAAAGTAA
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Component; Cation Efflux Family Protein; Cation Transporter; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux Transporter Protein; CDF Family Transporter
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTLSEQAPPMLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIVFDGMFSALDAGMCSLSLLVSRLLGQPHSRRF QYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRELELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDT KSWFMSACISTALLVAFLLSWGMEGTRYEHLIVYADPIVLALLTLVLISVPIKTVIAAVREVLQMTPDTLDTAIETLMER LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMETRGVHHFDTIRDEIAHEIGESGPHRWLTISFTRDAKWL
Sequences:
>Translated_312_residues MTTLSEQAPPMLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIVFDGMFSALDAGMCSLSLLVSRLLGQPHSRRF QYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRELELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDT KSWFMSACISTALLVAFLLSWGMEGTRYEHLIVYADPIVLALLTLVLISVPIKTVIAAVREVLQMTPDTLDTAIETLMER LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMETRGVHHFDTIRDEIAHEIGESGPHRWLTISFTRDAKWL >Mature_311_residues TTLSEQAPPMLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIVFDGMFSALDAGMCSLSLLVSRLLGQPHSRRFQ YGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRELELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDTK SWFMSACISTALLVAFLLSWGMEGTRYEHLIVYADPIVLALLTLVLISVPIKTVIAAVREVLQMTPDTLDTAIETLMERL VDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMETRGVHHFDTIRDEIAHEIGESGPHRWLTISFTRDAKWL
Specific function: Unknown
COG id: COG3965
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35255; Mature: 35124
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSEQAPPMLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIVFDGMFSALDAG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCSLSLLVSRLLGQPHSRRFQYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRE HHHHHHHHHHHHCCCCCCCEECCEEEHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCE LELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDTKSWFMSACISTALLVAFLLS EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH WGMEGTRYEHLIVYADPIVLALLTLVLISVPIKTVIAAVREVLQMTPDTLDTAIETLMER CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMETRGVHHFDTIRDEIAHEIGESGPHRW HHHHHHHCCHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE LTISFTRDAKWL EEEEECCCCCCC >Mature Secondary Structure TTLSEQAPPMLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIVFDGMFSALDAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCSLSLLVSRLLGQPHSRRFQYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRE HHHHHHHHHHHHCCCCCCCEECCEEEHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCE LELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDTKSWFMSACISTALLVAFLLS EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH WGMEGTRYEHLIVYADPIVLALLTLVLISVPIKTVIAAVREVLQMTPDTLDTAIETLMER CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMETRGVHHFDTIRDEIAHEIGESGPHRW HHHHHHHCCHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE LTISFTRDAKWL EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA