| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949329
Identifier: 153949329
GI number: 153949329
Start: 1744734
End: 1745306
Strand: Direct
Name: 153949329
Synonym: YpsIP31758_1503
Alternate gene names: NA
Gene position: 1744734-1745306 (Clockwise)
Preceding gene: 153948811
Following gene: 153950257
Centisome position: 36.94
GC content: 39.09
Gene sequence:
>573_bases ATGCCAGGTCGTATTCAACCAATGCCTCAATCATGGCTTACCGCTAGCAGACCCGCTGCAGAGAGTGTAAAACAACCATC AACGGGTTTAGTAAAAGACAGTAGTCTTAATAAAGACATAAAAACCGCAAGTACAGAGGCTTTTCTGGAAAAGGTAGATG CCTGGATGCTGGTTATTTGTGCCAGGAAAATGGACGGCGCTATTGTGGAAGAATGCATTAATGAATTAAGTAATAAAATG GATGCATTGTATAAAGAGCTATCCGATACCCGAAATCAGGTTTATAAACTTGTTCCCAATGATGGGCGGGGAGGTGGCCG AATAGCCCAGTTAAGAGAGGGATATGATGCAACCGATAGAGAACATTATTTAGAAAAATTGATTGCTTATAATCAGATTA AGCAGGTCATTAGTGATGAAATTGAGTATACACCTAAAAAATATGCTGATTCAATAGAGAGGATTGTTGATTTACACCAT TCGGGTTCTATTTATGGTGACTTAATGGCGCTGAATAAAAACAGTGATGTTCCTAATCTTGGTTATAACCTTGGTCGCAT TCAGTTTGGATAA
Upstream 100 bases:
>100_bases ATAAAAGAATATCCCCTAAAAATAATTAATACTCCTTATCAACATTGAACGTCCTTATTTTTCACCCAATAAGGGCTTAA CCACCACAAGGAGTTATTCT
Downstream 100 bases:
>100_bases AATACTTATCGTAAATAATTAGGTTTTTATTTTTAATCCTAGCCTATATTGACAGGTTATTGTTTTGGTAATCAGTTTAT TACCATGTTCAATAGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPGRIQPMPQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVICARKMDGAIVEECINELSNKM DALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDREHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHH SGSIYGDLMALNKNSDVPNLGYNLGRIQFG
Sequences:
>Translated_190_residues MPGRIQPMPQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVICARKMDGAIVEECINELSNKM DALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDREHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHH SGSIYGDLMALNKNSDVPNLGYNLGRIQFG >Mature_189_residues PGRIQPMPQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVICARKMDGAIVEECINELSNKMD ALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDREHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHHS GSIYGDLMALNKNSDVPNLGYNLGRIQFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21310; Mature: 21179
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRIQPMPQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVIC CCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARKMDGAIVEECINELSNKMDALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCHH EHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHHSGSIYGDLMALNKNSDVPNL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCCCC GYNLGRIQFG CCCCCCEECC >Mature Secondary Structure PGRIQPMPQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVIC CCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARKMDGAIVEECINELSNKMDALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCHH EHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHHSGSIYGDLMALNKNSDVPNL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCCCC GYNLGRIQFG CCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA