| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is katG
Identifier: 153948755
GI number: 153948755
Start: 3662557
End: 3664770
Strand: Direct
Name: katG
Synonym: YpsIP31758_3254
Alternate gene names: 153948755
Gene position: 3662557-3664770 (Clockwise)
Preceding gene: 153948301
Following gene: 153948308
Centisome position: 77.54
GC content: 45.84
Gene sequence:
>2214_bases ATGTTAAAAAAAATCTTACCCGTACTAATAACTCTCGCCATTGTACATAATACACCTACGGCTTGGGCAGCAGAAGCACC CAAGACTGATAGTTTTTACTTACCCAAAAGCCTCGATCTCTCTCCACTCCGTTTACATAATATAGAGTCCAATCCTTACG GAAAGGATTTTAATTATGCTCAACAGTTTAAAACACTGGATCTTGAAGCAGTAAAGAAAGATATAAAAACAGTTCTTACC ACATCACAAGACTGGTGGCCTGCCGATTATGGTAATTATGGTCCATTCTTTATTCGTATGGCATGGCATGGTGCGGGAAC CTACCGTATATATGATGGCCGTGGTGGTGCCGATGGCGGGCAGCAAAGATTTGAGCCACTCAATAGCTGGCCAGATAACG CCAACCTTGATAAAGCGCGTCGGCTTCTGTGGCCTATAAAAAAGAAATATGGCGCTAAAATATCGTGGGGCGACCTGATG GTCCTTACAGGCAATGTCGCGCTCGAATCTATGGGGTTTAAAACGCTGGGGTTTGCAGGAGGCCGTGAGGATGATTGGCA ATCCGATCTGGTCTACTGGGGGGCAGGCAACAAGATGCTGTCTGATAACAGGGATAAAAATGGCAAGCTACCCAAACCGC TGGCGGCGACACAAATGGGGTTGATTTACGTAAACCCTGAAGGACCAAATGGTAAACCAGACCCGGTTGCTGCGGCAAAA GATATTCGTGAAGCGTTTGCCAGGATGGCAATGAATGATGAGGAGACCGTGGCATTGATTGCGGGAGGGCATACCTTCGG TAAAGCGCATGGCGCAGCGTCTCCTGAAAAATGCCTGGGTGCAGCACCGGGTGAAGCGGGGCTAGAACAACAAGGTTTAG GATGGGCGAATAAATGTGGTTCAGGTAATGGTAAGGACACGATAACCAGTGGGTTGGAAGGGGCATGGACAACCGATCCT ACGCATTTTACGATGCAATACCTGAGTAATTTATACAAACATGAGTGGGTATTGACCAAGAGCCCAGCTGGGGCCTGGCA ATGGAAGCCTAAAAATGCAGCCAATGTCGTTCCAGATGCAACCGATCCAACTAAGTTCCATCCTTTGATGATGTTCACAA CGGATATTGCCCTAAAAGTTGATCCTGAATACAAGAAAATAACAACACGTTTTCTGGAAAACCCTGAAGAATTCAAGATG GCATTTGCCCGCGCGTGGTTCAAACTGACACACCGTGATATGGGGCCCGCAGCGCGTTATCTGGGGGATGAGGTACCTAA AGAAACATTTATCTGGCAAGACCCGCTGCCTGCTGCCAATTATAAGATGATTGACAGTGCGGATATTTCTGAACTGAAAG ATAAAATATTGAAGACAGGTTTATCTGATACAAAACTGATTAAGACCGCTTGGGCTTCAGCATCCACATTCCGTGGTACC GATTTCCGCGGCGGTGATAACGGCGCCCGAATTCGTCTGGCACCACAAAAAGACTGGCCAGTTAACGATCCCGCAGAGCT ACACAGTGTACTGGCGGCACTCATGGAGGTTCAGAACAATTTCAATAAAGACAGAAGCGATGGTAAAAAAGTATCCCTAT CGGACCTGATTGTTCTGGGCGGAAATGCAGCCATTGAGGATGCAGCTAAAAAAGCGGGATACAATATCAGTATTCCATTT ACACCGGGTCGGACAGATGCTTCTCAGGAAGAAACCGATGTCAGTTCTTTCGCGGTACTGGAACCCACAGCCGATGGATT CCGTAATTACTACGATGCAAAAAGAAATACGCTTTCGCCTATCGCGTCGTTGATTGATCGGGCGAATAAACTGGAACTGA CCGTGCCTGAAATGACAGTACTGATTGGTGGACTTCGTGTACTGGATGTTAACTCGGGAGGGTCTAAGGCTGGTGTGTTG ACGAATACGCCAGGGCAGCTTAATAACAACTTTTTTGTTAACCTGCTTGATATGTCAACCAAATGGACTAAATCACCTAA AGCTGAAGGATATTTCGATGGGTATGATCGAAAAACAGGGAAACTTAAATGGACAGCAAGTTCTGTAGATTTAGTCTTTG GTTCAAACCCTGAACTCAGAGCGGTTGCGGAAGTTTATGCCTCTGATGATGCCAAAGAAAAATTTGTTCATGACTTTACT AAAGTATGGGAAAAAGTCATGAACCTTGATCGCTTTGATATAAAAAATAACTAA
Upstream 100 bases:
>100_bases TAATAGATAGAATCTATCATATTAATAGGACTAACGAATTGTATTTTCCAATTTAACCATGTTAAAAAATAGTTGCCTTT TAGTTAAAGGGGACTTATAT
Downstream 100 bases:
>100_bases CTAAATAGAGGGGAGGATTTATCTTCCCCCCCTCTATTTATAAGAGAAGAAAATCATAATATAAGAGGTAACGATAATGC GAAAAATTCCAATAATTGCG
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MLKKILPVLITLAIVHNTPTAWAAEAPKTDSFYLPKSLDLSPLRLHNIESNPYGKDFNYAQQFKTLDLEAVKKDIKTVLT TSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLM VLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAK DIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDP THFTMQYLSNLYKHEWVLTKSPAGAWQWKPKNAANVVPDATDPTKFHPLMMFTTDIALKVDPEYKKITTRFLENPEEFKM AFARAWFKLTHRDMGPAARYLGDEVPKETFIWQDPLPAANYKMIDSADISELKDKILKTGLSDTKLIKTAWASASTFRGT DFRGGDNGARIRLAPQKDWPVNDPAELHSVLAALMEVQNNFNKDRSDGKKVSLSDLIVLGGNAAIEDAAKKAGYNISIPF TPGRTDASQEETDVSSFAVLEPTADGFRNYYDAKRNTLSPIASLIDRANKLELTVPEMTVLIGGLRVLDVNSGGSKAGVL TNTPGQLNNNFFVNLLDMSTKWTKSPKAEGYFDGYDRKTGKLKWTASSVDLVFGSNPELRAVAEVYASDDAKEKFVHDFT KVWEKVMNLDRFDIKNN
Sequences:
>Translated_737_residues MLKKILPVLITLAIVHNTPTAWAAEAPKTDSFYLPKSLDLSPLRLHNIESNPYGKDFNYAQQFKTLDLEAVKKDIKTVLT TSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLM VLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAK DIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDP THFTMQYLSNLYKHEWVLTKSPAGAWQWKPKNAANVVPDATDPTKFHPLMMFTTDIALKVDPEYKKITTRFLENPEEFKM AFARAWFKLTHRDMGPAARYLGDEVPKETFIWQDPLPAANYKMIDSADISELKDKILKTGLSDTKLIKTAWASASTFRGT DFRGGDNGARIRLAPQKDWPVNDPAELHSVLAALMEVQNNFNKDRSDGKKVSLSDLIVLGGNAAIEDAAKKAGYNISIPF TPGRTDASQEETDVSSFAVLEPTADGFRNYYDAKRNTLSPIASLIDRANKLELTVPEMTVLIGGLRVLDVNSGGSKAGVL TNTPGQLNNNFFVNLLDMSTKWTKSPKAEGYFDGYDRKTGKLKWTASSVDLVFGSNPELRAVAEVYASDDAKEKFVHDFT KVWEKVMNLDRFDIKNN >Mature_737_residues MLKKILPVLITLAIVHNTPTAWAAEAPKTDSFYLPKSLDLSPLRLHNIESNPYGKDFNYAQQFKTLDLEAVKKDIKTVLT TSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLM VLTGNVALESMGFKTLGFAGGREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAK DIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDP THFTMQYLSNLYKHEWVLTKSPAGAWQWKPKNAANVVPDATDPTKFHPLMMFTTDIALKVDPEYKKITTRFLENPEEFKM AFARAWFKLTHRDMGPAARYLGDEVPKETFIWQDPLPAANYKMIDSADISELKDKILKTGLSDTKLIKTAWASASTFRGT DFRGGDNGARIRLAPQKDWPVNDPAELHSVLAALMEVQNNFNKDRSDGKKVSLSDLIVLGGNAAIEDAAKKAGYNISIPF TPGRTDASQEETDVSSFAVLEPTADGFRNYYDAKRNTLSPIASLIDRANKLELTVPEMTVLIGGLRVLDVNSGGSKAGVL TNTPGQLNNNFFVNLLDMSTKWTKSPKAEGYFDGYDRKTGKLKWTASSVDLVFGSNPELRAVAEVYASDDAKEKFVHDFT KVWEKVMNLDRFDIKNN
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=713, Percent_Identity=55.5399719495091, Blast_Score=751, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6322919, Length=321, Percent_Identity=27.7258566978193, Blast_Score=101, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_YERP3 (A7FLT3)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001402211.1 - ProteinModelPortal: A7FLT3 - SMR: A7FLT3 - STRING: A7FLT3 - GeneID: 5385833 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_3254 - NMPDR: fig|349747.3.peg.3455 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: KNKCGKG - ProtClustDB: PRK15061 - BioCyc: YPSE349747:YPSIP31758_3254-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 81393; Mature: 81393
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4; PS00018 EF_HAND_1
Important sites: ACT_SITE 103-103
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKILPVLITLAIVHNTPTAWAAEAPKTDSFYLPKSLDLSPLRLHNIESNPYGKDFNYA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHH QQFKTLDLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGG HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCC QQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEECCEEEHHCCCCEEECCC GREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAK CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCHHHHH DIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCG HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCC SGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHEWVLTKSPAGAWQWKPKNAANVVPDA CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCC TDPTKFHPLMMFTTDIALKVDPEYKKITTRFLENPEEFKMAFARAWFKLTHRDMGPAARY CCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH LGDEVPKETFIWQDPLPAANYKMIDSADISELKDKILKTGLSDTKLIKTAWASASTFRGT HCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC DFRGGDNGARIRLAPQKDWPVNDPAELHSVLAALMEVQNNFNKDRSDGKKVSLSDLIVLG CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEC GNAAIEDAAKKAGYNISIPFTPGRTDASQEETDVSSFAVLEPTADGFRNYYDAKRNTLSP CCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH IASLIDRANKLELTVPEMTVLIGGLRVLDVNSGGSKAGVLTNTPGQLNNNFFVNLLDMST HHHHHHCCCCEEEECCHHHHHHCCEEEEEECCCCCCCCEEECCCCCCCCCEEEEEEECCC KWTKSPKAEGYFDGYDRKTGKLKWTASSVDLVFGSNPELRAVAEVYASDDAKEKFVHDFT CCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHH KVWEKVMNLDRFDIKNN HHHHHHHCCCCCCCCCC >Mature Secondary Structure MLKKILPVLITLAIVHNTPTAWAAEAPKTDSFYLPKSLDLSPLRLHNIESNPYGKDFNYA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHH QQFKTLDLEAVKKDIKTVLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRIYDGRGGADGG HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCC QQRFEPLNSWPDNANLDKARRLLWPIKKKYGAKISWGDLMVLTGNVALESMGFKTLGFAG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEECCEEEHHCCCCEEECCC GREDDWQSDLVYWGAGNKMLSDNRDKNGKLPKPLAATQMGLIYVNPEGPNGKPDPVAAAK CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCHHHHH DIREAFARMAMNDEETVALIAGGHTFGKAHGAASPEKCLGAAPGEAGLEQQGLGWANKCG HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCC SGNGKDTITSGLEGAWTTDPTHFTMQYLSNLYKHEWVLTKSPAGAWQWKPKNAANVVPDA CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCC TDPTKFHPLMMFTTDIALKVDPEYKKITTRFLENPEEFKMAFARAWFKLTHRDMGPAARY CCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH LGDEVPKETFIWQDPLPAANYKMIDSADISELKDKILKTGLSDTKLIKTAWASASTFRGT HCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC DFRGGDNGARIRLAPQKDWPVNDPAELHSVLAALMEVQNNFNKDRSDGKKVSLSDLIVLG CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEC GNAAIEDAAKKAGYNISIPFTPGRTDASQEETDVSSFAVLEPTADGFRNYYDAKRNTLSP CCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH IASLIDRANKLELTVPEMTVLIGGLRVLDVNSGGSKAGVLTNTPGQLNNNFFVNLLDMST HHHHHHCCCCEEEECCHHHHHHCCEEEEEECCCCCCCCEEECCCCCCCCCEEEEEEECCC KWTKSPKAEGYFDGYDRKTGKLKWTASSVDLVFGSNPELRAVAEVYASDDAKEKFVHDFT CCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHH KVWEKVMNLDRFDIKNN HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA