| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948703
Identifier: 153948703
GI number: 153948703
Start: 4176218
End: 4177171
Strand: Reverse
Name: 153948703
Synonym: YpsIP31758_3701
Alternate gene names: NA
Gene position: 4177171-4176218 (Counterclockwise)
Preceding gene: 153948810
Following gene: 153948995
Centisome position: 88.44
GC content: 53.56
Gene sequence:
>954_bases ATGACTCTCACGTCTCTGCGCCATCGGCGATTATTACCGCTTATTCTCCTTATCGGTAGCAGCCAGTGTATGGCGAACGT CAACACCGCAAGCTTGATTATCAGTGCGGCCAGCGCTTCGTGCATCAGTTGGAAAGTGAAAGGAATCTGCTACTGGTTGC TGTGTACGCCTTTGGGTTGTTCAGTGAAAACCTCCGTCAAAGTTGAGCATTTTATTCCCGAAGCCGTTGTCTCTGCCTAC AGCGGCCCCGGCGATAATCCCTGGGTGGAGATGGCTGCTGTCAGCAGAGCCGCTAGTGGGGCTGAAAGCGGTATTACGGG TATGCTGACTGGCGGTGGTCAACAGCAAATGAAGGCACCTGGCTTACGTCAACAGAACCTGCGCTACCATTATGCAGATG CCTATGGACATCCGGCGACCTCGCTGATGGGGGGCAATATTGCAGGCTATTCCTGCCGTTCAGCCGCCACTCCTTTTGCC CCTTATTTTGTCAGTGCCCTCGATGCTTTGGTATGGCGCAGTGGTTTGCCTGAATCTCTCTATCCAGAAGCACTCATCCC CGGGCAACGTGAACTGGGTCGCCAGTCAAACGCCAATATGTGGGGGAATATTTACCCTCGTAGCGGTTTTGTTATTCAGC AGGATAGCTATAAATCCGCTGCGGTAGTCGCCCAACGGGTTGCCGATATTATTACTCGTCATGGTCAACTGCATGTTTAT CACCCCCTGGTTGGTCAACCTTCGCCGGGCTATTGGCCGCCTGACCCGGTTCGTGAGAATACCGGTAGCCAGAATCATAA ATGGCAGCGTCTGGAGCCACAGCTCTCAACGGCCTGCGCTATTTTTCCAGAGGCTAACGGCCCCATTGCTCAGAGCGGTA ACTATGCCTGGGCACTCTGGCAACCTTACAGTTGCTGTAAGCGGCGTGGGCAAACCTTCCTCTTACATCACTGA
Upstream 100 bases:
>100_bases AATATCCGGCAGTGGTATTCGATGACCAGTGGGTAGTGTACGGAACCACCGATATCGACGTGGCTACGCAGCAGTTCACC CTCTGGCGGGAGACTAATCA
Downstream 100 bases:
>100_bases TTTTGATGAGATAACTCCCCATGACACAGCATAATTATTTCTTCCTGCAGCTGATGGCTACGGCTTTCGTGTTAATTGGC AGCGTTGCTGCTGGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTLTSLRHRRLLPLILLIGSSQCMANVNTASLIISAASASCISWKVKGICYWLLCTPLGCSVKTSVKVEHFIPEAVVSAY SGPGDNPWVEMAAVSRAASGAESGITGMLTGGGQQQMKAPGLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPFA PYFVSALDALVWRSGLPESLYPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKSAAVVAQRVADIITRHGQLHVY HPLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTACAIFPEANGPIAQSGNYAWALWQPYSCCKRRGQTFLLHH
Sequences:
>Translated_317_residues MTLTSLRHRRLLPLILLIGSSQCMANVNTASLIISAASASCISWKVKGICYWLLCTPLGCSVKTSVKVEHFIPEAVVSAY SGPGDNPWVEMAAVSRAASGAESGITGMLTGGGQQQMKAPGLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPFA PYFVSALDALVWRSGLPESLYPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKSAAVVAQRVADIITRHGQLHVY HPLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTACAIFPEANGPIAQSGNYAWALWQPYSCCKRRGQTFLLHH >Mature_316_residues TLTSLRHRRLLPLILLIGSSQCMANVNTASLIISAASASCISWKVKGICYWLLCTPLGCSVKTSVKVEHFIPEAVVSAYS GPGDNPWVEMAAVSRAASGAESGITGMLTGGGQQQMKAPGLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPFAP YFVSALDALVWRSGLPESLYPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKSAAVVAQRVADIITRHGQLHVYH PLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTACAIFPEANGPIAQSGNYAWALWQPYSCCKRRGQTFLLHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34484; Mature: 34352
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSLRHRRLLPLILLIGSSQCMANVNTASLIISAASASCISWKVKGICYWLLCTPLGC CCCCHHHHHHHHEEHEEECCCHHHCCCCHHHEEEECCCCCEEEEEHHHEEEEEEECCCCC SVKTSVKVEHFIPEAVVSAYSGPGDNPWVEMAAVSRAASGAESGITGMLTGGGQQQMKAP CEEECEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCC GLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPFAPYFVSALDALVWRSGLPESL CCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC YPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKSAAVVAQRVADIITRHGQLHVY CCCCCCCCHHHHCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE HPLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTACAIFPEANGPIAQSGNYAWALW CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCEEEEEECCCCCCCCCCCEEEEEC QPYSCCKRRGQTFLLHH CCHHHHHHCCCEEEECC >Mature Secondary Structure TLTSLRHRRLLPLILLIGSSQCMANVNTASLIISAASASCISWKVKGICYWLLCTPLGC CCCHHHHHHHHEEHEEECCCHHHCCCCHHHEEEECCCCCEEEEEHHHEEEEEEECCCCC SVKTSVKVEHFIPEAVVSAYSGPGDNPWVEMAAVSRAASGAESGITGMLTGGGQQQMKAP CEEECEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCC GLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPFAPYFVSALDALVWRSGLPESL CCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC YPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKSAAVVAQRVADIITRHGQLHVY CCCCCCCCHHHHCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE HPLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTACAIFPEANGPIAQSGNYAWALW CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCEEEEEECCCCCCCCCCCEEEEEC QPYSCCKRRGQTFLLHH CCHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA