| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948995
Identifier: 153948995
GI number: 153948995
Start: 4174791
End: 4176197
Strand: Reverse
Name: 153948995
Synonym: YpsIP31758_3700
Alternate gene names: NA
Gene position: 4176197-4174791 (Counterclockwise)
Preceding gene: 153948703
Following gene: 153949553
Centisome position: 88.42
GC content: 53.38
Gene sequence:
>1407_bases ATGACACAGCATAATTATTTCTTCCTGCAGCTGATGGCTACGGCTTTCGTGTTAATTGGCAGCGTTGCTGCTGGTGCGGC TTCTGTATCCAATAATGGCTTGTCAGCAAGTGGTGCCATCAGCGATGGCTTGTTCTACTCCATCGGGGGCGGCACCGTCA TTTCGCCATCTTCTTCACGAAACAACATGACCCGCTTGGGCATGACTGGAAGCTGGAATAGTGACCTGATGTGCGGCAAT TTTGACCTGAAAACCACGGTAGGTAATCAGCTCAATGGGGTAACCAGCGGTTTTAAGGATTTGATGAGTGATGTGATTCA AGGGGCGACTGGAGCGGTGGCCAGCATGCCAGCGATGGTTATCCAACGCGCTAATCCGGGCCTGTATGAAATGCTGACCA ATGGGATGCTACAAGCTGGTCTGAGCTTCGATAAATCAAAACTCAACTGTCAGAATTTGGCGAAAAAAATGGCCGATTAC ACCCTGGGGAACAAGTGGACGCAGGCTGCGGTGGCTGAAGAATACAAGAGCATTGTTGCCTCAAGTGACGGTGATGCGGT TAGCAGCGACCATCAATTACACAAGGCTACCGGCGAAGAGGGCACCACCTGGATTGGCGGGCGGAAGCGCGGTGGCAAAG GCCAGCCAGCCATTAAGCCCACGTATGATCTCGCTAAAGCGGGTTACAACATGATGAATAATCTGCCGGTTACCAGTAAC CACTCGATAGTCGCCGTAAACTGCAATGGGGCAGTTTGTCTGCGCTATAAAAACTCAGAAGAAGCCGCGACCGCAGTGGT AAAAGTGCTCGGTGATCGTTCTATACGCACCTGCCGCGAAGCCAGTGCGTGCAGCAGCGGTGGTGGCGAGAACAGGTCTG GCAGTACCGTTGCGGGCAGCGGATTTTCTCCCATGATTGAAGAAACTACCAAAGAGAATCTGGAGCAATTGATCAAGTTG GTTGGCGGGCGGGAGAAACCCACAACAGAAAGTCTGGCGAAGCTAAAAACGGGAGGCCTTGTTGTTACCCGAGGAGTGAT CCAATCGCTGAAAGATGATCCAGACAATTCGGCGTTGATACAGCGGCTGGCGGGTGAGTTGGCCATGGCTGACACCGTGG AAAATGCGCTGACCATGCGACGGATGCTCACTACCGGCCAGGCGGAGCCTAATGCCGCCGATCAGCCTGAAGCCCTGGCC GAAGGAGACCGGCGTATTGAGGCACTGGATCGCGAGCTTGCCGCACTGCGTAATGAAATGGAACTGCGTAAGGCCATCAG TAATAACAGCCTGCTTACCACGCTTGAGCGTCAGGGGCGACGTAATCAGGACAACCGTCTACAGCAGCAGAGCGGGGATC AAGATCAGGGCTTTAGCCAGATGAGCCAGAAAACGAGAGAACCCTAA
Upstream 100 bases:
>100_bases GCGGTAACTATGCCTGGGCACTCTGGCAACCTTACAGTTGCTGTAAGCGGCGTGGGCAAACCTTCCTCTTACATCACTGA TTTTGATGAGATAACTCCCC
Downstream 100 bases:
>100_bases TGACGGCAAACAGTTTCCTTGAATATTTCCTGGTGCTGTTCGGGTGGATGCTAAACAACGCGCTGTGGAATATTTTGCTG GGCACAGGACTGTTCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTQHNYFFLQLMATAFVLIGSVAAGAASVSNNGLSASGAISDGLFYSIGGGTVISPSSSRNNMTRLGMTGSWNSDLMCGN FDLKTTVGNQLNGVTSGFKDLMSDVIQGATGAVASMPAMVIQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMADY TLGNKWTQAAVAEEYKSIVASSDGDAVSSDHQLHKATGEEGTTWIGGRKRGGKGQPAIKPTYDLAKAGYNMMNNLPVTSN HSIVAVNCNGAVCLRYKNSEEAATAVVKVLGDRSIRTCREASACSSGGGENRSGSTVAGSGFSPMIEETTKENLEQLIKL VGGREKPTTESLAKLKTGGLVVTRGVIQSLKDDPDNSALIQRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPEALA EGDRRIEALDRELAALRNEMELRKAISNNSLLTTLERQGRRNQDNRLQQQSGDQDQGFSQMSQKTREP
Sequences:
>Translated_468_residues MTQHNYFFLQLMATAFVLIGSVAAGAASVSNNGLSASGAISDGLFYSIGGGTVISPSSSRNNMTRLGMTGSWNSDLMCGN FDLKTTVGNQLNGVTSGFKDLMSDVIQGATGAVASMPAMVIQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMADY TLGNKWTQAAVAEEYKSIVASSDGDAVSSDHQLHKATGEEGTTWIGGRKRGGKGQPAIKPTYDLAKAGYNMMNNLPVTSN HSIVAVNCNGAVCLRYKNSEEAATAVVKVLGDRSIRTCREASACSSGGGENRSGSTVAGSGFSPMIEETTKENLEQLIKL VGGREKPTTESLAKLKTGGLVVTRGVIQSLKDDPDNSALIQRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPEALA EGDRRIEALDRELAALRNEMELRKAISNNSLLTTLERQGRRNQDNRLQQQSGDQDQGFSQMSQKTREP >Mature_467_residues TQHNYFFLQLMATAFVLIGSVAAGAASVSNNGLSASGAISDGLFYSIGGGTVISPSSSRNNMTRLGMTGSWNSDLMCGNF DLKTTVGNQLNGVTSGFKDLMSDVIQGATGAVASMPAMVIQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMADYT LGNKWTQAAVAEEYKSIVASSDGDAVSSDHQLHKATGEEGTTWIGGRKRGGKGQPAIKPTYDLAKAGYNMMNNLPVTSNH SIVAVNCNGAVCLRYKNSEEAATAVVKVLGDRSIRTCREASACSSGGGENRSGSTVAGSGFSPMIEETTKENLEQLIKLV GGREKPTTESLAKLKTGGLVVTRGVIQSLKDDPDNSALIQRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPEALAE GDRRIEALDRELAALRNEMELRKAISNNSLLTTLERQGRRNQDNRLQQQSGDQDQGFSQMSQKTREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49799; Mature: 49667
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHNYFFLQLMATAFVLIGSVAAGAASVSNNGLSASGAISDGLFYSIGGGTVISPSSSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEECCCCCC NNMTRLGMTGSWNSDLMCGNFDLKTTVGNQLNGVTSGFKDLMSDVIQGATGAVASMPAMV CCCEEECCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMADYTLGNKWTQAAVAEEYKSIVA HHCCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SSDGDAVSSDHQLHKATGEEGTTWIGGRKRGGKGQPAIKPTYDLAKAGYNMMNNLPVTSN CCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC HSIVAVNCNGAVCLRYKNSEEAATAVVKVLGDRSIRTCREASACSSGGGENRSGSTVAGS CCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECC GFSPMIEETTKENLEQLIKLVGGREKPTTESLAKLKTGGLVVTRGVIQSLKDDPDNSALI CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHH QRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPEALAEGDRRIEALDRELAALRNEM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ELRKAISNNSLLTTLERQGRRNQDNRLQQQSGDQDQGFSQMSQKTREP HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TQHNYFFLQLMATAFVLIGSVAAGAASVSNNGLSASGAISDGLFYSIGGGTVISPSSSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEECCCCCC NNMTRLGMTGSWNSDLMCGNFDLKTTVGNQLNGVTSGFKDLMSDVIQGATGAVASMPAMV CCCEEECCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMADYTLGNKWTQAAVAEEYKSIVA HHCCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SSDGDAVSSDHQLHKATGEEGTTWIGGRKRGGKGQPAIKPTYDLAKAGYNMMNNLPVTSN CCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC HSIVAVNCNGAVCLRYKNSEEAATAVVKVLGDRSIRTCREASACSSGGGENRSGSTVAGS CCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECC GFSPMIEETTKENLEQLIKLVGGREKPTTESLAKLKTGGLVVTRGVIQSLKDDPDNSALI CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHH QRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPEALAEGDRRIEALDRELAALRNEM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ELRKAISNNSLLTTLERQGRRNQDNRLQQQSGDQDQGFSQMSQKTREP HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA