| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948680
Identifier: 153948680
GI number: 153948680
Start: 2392063
End: 2392449
Strand: Reverse
Name: 153948680
Synonym: YpsIP31758_2081
Alternate gene names: NA
Gene position: 2392449-2392063 (Counterclockwise)
Preceding gene: 153948257
Following gene: 153947190
Centisome position: 50.65
GC content: 44.96
Gene sequence:
>387_bases ATGAATAAATTACGGTTCACTTCACTGACAAAACATCTGATTTTATTTCTGGCGGTTGCTGTCAGCAGTTTGAGTTTGAT AGCCGAGGCAGCAGACCGCAATGCCCGACGAGTCCTGATTGTTTATTTCTCTCAACCTGAGGATGTAAAATTAGAGGGTG TTGATGGTGTATCGGGTGCGAGCATATTGCAAAAAAACGGTGAAGTTCTAGGAAGTACCCAGTATGTAGCACAGATTATC CAGGAGGAAACTGGCGGCGATTTATTCCGCATTGAAACGGTTAAACCCTACCCGCGTCAACATGACCCCTTGCTGAAATA TGCAGAGCAAGAAGTGAAAGAGGGAGGGCGACCCGAAATGAGAGAGAAAATACAAAAGGGTGACTAA
Upstream 100 bases:
>100_bases TCACAGTCATTTCTGTGGCATCTGCACGGTACGGTTTATGGCTTAACAATGAAGAACGTTGTTAATTACGGATGACTCAC TTTACCCCTTGGCGAGCGCT
Downstream 100 bases:
>100_bases CGCTATTCACTGTCAGAAGGAGCTATCAATTGAGTAAAGCTGGTATTCAGTCTAATAGGGGGGATGGATATCAAACGTTG GTAGCGTTTGACTGGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQKGD
Sequences:
>Translated_128_residues MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQKGD >Mature_128_residues MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQKGD
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14285; Mature: 14285
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCHH SILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEM HHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHH REKIQKGD HHHHHCCC >Mature Secondary Structure MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCHH SILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEM HHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHH REKIQKGD HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA