| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is ycjY [H]
Identifier: 153948257
GI number: 153948257
Start: 2392640
End: 2393629
Strand: Reverse
Name: ycjY [H]
Synonym: YpsIP31758_2082
Alternate gene names: 153948257
Gene position: 2393629-2392640 (Counterclockwise)
Preceding gene: 153947688
Following gene: 153948680
Centisome position: 50.68
GC content: 48.08
Gene sequence:
>990_bases ATGTCAGCCGATTATAAATTAAATCCATTTACACTGACTTATGACGGCGCGATTACCGAAAACGTGAAAGGCAAAGTCAA TATTCATCCTGTTACTTATAAGCTAAATGGTTTGGAAATTTCTGCCAACGTATATACCCCTGCGAATTATGATCCCGCTA AAAAATACCCGGCCGTGGTGGTGGCTCACCCCAATGGTGGCGTGAAAGAGCAGGTCGCTGGCTTGTATGCTCAGCGTTTG GCAGAGCAAGGCTATATCACCATTACTGCGGATGCCGCGTATCAAGGCGCGAGTGGCGGCTTGCCCCGCAATGTCGACAA ACCCGCTTACCGCATTGAAGATATTCACGGCATGGCAGACTTTATTACCCAATATCCTGGGGTGGACACGGTCCGTTTAG GCCTGCTGGGTATTTGCGGCGGTGGGGGCTACTCCTTGAAAGCCGGGCAAACCGACAAGCGCTTCAGCGCGATTGCCACG TTGAGCATGTTTGATTCCGGTCTGGTAAGACGCAACGGTTATCAGGACTCACAACTTTCCACAATACAAGAACGTTTAAA ACAAGCCTCTGATGCACGAGCACAGGAAGCTGCTGGTGGAGAGGTTACTTACGTTGGGGATGCCAAACTGACTGATGAGC AAATTGCCAAACTGCCGTTTGACCTTTATCGGCAGGGTTTTGAGTACTACGGTAAAACGCATGCTCACCCCAATTCAACC TTCAGATACACCGCCAGCAGTCTGCTCGACTTAATGAGATTCGATGCGGCAAGCAATATGGATTTAATCGATAAACCGCT ACTGATGATGGCAGGCAGTAAAGCCGATTCCCTGTATATGAGCGAAACAGCGTTTAAAGGTGCTAGCAACGCAAAAGATA AGGAACTGTTCCTGATTGATGGTGCGACCCACATTGAAACCTATTGGCAGCCGGAATATGTGAATCAGGCTATAGGTAAA TTGGCTCAGTTCTACGGGAAAAATTTATAA
Upstream 100 bases:
>100_bases GAAACACAATGCTTTTAAAATGACATCCGTTTTTAAAACGACATCGGTTTTTAAATCTACCTTGTTAGCGGCAGTGATCA GTCTTTCATCTGGGGGAGCA
Downstream 100 bases:
>100_bases AAGAGAAACGGATACTCCCTCTCTTTTCGTCTGTGCCAACACTGGCGGATATTGCGGATAGAGAGCGGTATTTGTCAGCC ATACCTGATGTCACAGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRL AEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMADFITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIAT LSMFDSGLVRRNGYQDSQLSTIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLIDGATHIETYWQPEYVNQAIGK LAQFYGKNL
Sequences:
>Translated_329_residues MSADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRL AEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMADFITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIAT LSMFDSGLVRRNGYQDSQLSTIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLIDGATHIETYWQPEYVNQAIGK LAQFYGKNL >Mature_328_residues SADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRLA EQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMADFITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIATL SMFDSGLVRRNGYQDSQLSTIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNSTF RYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLIDGATHIETYWQPEYVNQAIGKL AQFYGKNL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI221142683, Length=295, Percent_Identity=36.6101694915254, Blast_Score=192, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 35942; Mature: 35811
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVV CCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCEEE VAHPNGGVKEQVAGLYAQRLAEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMAD EECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIATLSMFDSGLVRRNGYQDSQLS HHHHCCCCCEEEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHH TIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCC FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLID EEECHHHHHHHHHHCCCCCCCHHCCCHHEEECCCCCCEEEHHHHHCCCCCCCCCEEEEEE GATHIETYWQPEYVNQAIGKLAQFYGKNL CCHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SADYKLNPFTLTYDGAITENVKGKVNIHPVTYKLNGLEISANVYTPANYDPAKKYPAVV CCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCEEE VAHPNGGVKEQVAGLYAQRLAEQGYITITADAAYQGASGGLPRNVDKPAYRIEDIHGMAD EECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FITQYPGVDTVRLGLLGICGGGGYSLKAGQTDKRFSAIATLSMFDSGLVRRNGYQDSQLS HHHHCCCCCEEEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHH TIQERLKQASDARAQEAAGGEVTYVGDAKLTDEQIAKLPFDLYRQGFEYYGKTHAHPNST HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCC FRYTASSLLDLMRFDAASNMDLIDKPLLMMAGSKADSLYMSETAFKGASNAKDKELFLID EEECHHHHHHHHHHCCCCCCCHHCCCHHEEECCCCCCEEEHHHHHCCCCCCCCCEEEEEE GATHIETYWQPEYVNQAIGKLAQFYGKNL CCHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]