Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153948641

Identifier: 153948641

GI number: 153948641

Start: 609436

End: 610098

Strand: Direct

Name: 153948641

Synonym: YpsIP31758_0518

Alternate gene names: NA

Gene position: 609436-610098 (Clockwise)

Preceding gene: 153950728

Following gene: 153948171

Centisome position: 12.9

GC content: 46.0

Gene sequence:

>663_bases
TTGAGTAGCCTTGGTGCTGATGTGATGAGCAGCGAGGAAGCCAAAGCCTATGTTCAGCAGTGGAATGGGCAGGATCTGTC
GAAGATAGATGTCAATAGCCCAGGGTGGACAAAGTTTGCGGCCTTTGCATCAGATCCGGAGAATCAGGTAGCGGTTGCGT
CACTGGGGATGCTGGGGAAGGATTTGACCAAAGCAGCACTCTCCTATATGGGGCGTAATACGTCTACAGCCACCGTCAGT
GCCTCTAGCGTGGGCATGAAATGGGGTCAGGGTAATATGAAGCAGGGGATGCCATGGGAAGATTATGTTGGGAAAACTTT
GCCAGTCGGATCTCGACTTCCCCCCAATTTCAAAACATACGATTACTTTGATCGTGCCACAGGCGCAGTTGTAAGTGCCA
AATCACTGGATACCCAGACGATGGCGAAGTTGTCTAATCCCAATCAGGTTTATAGCTCTATCAAAAAAAATATTGACGTA
ACTGCTAAATTTGAAAAAGCATCTCTTTCGGGTGTTACTGTTAATTCATCAATGATCACTAGTAAAGAAGTCCGTCTGGC
AGTACCTGTCAATACTACAAAAGCCCAATGGACAGAAATAAATCGGGCTATTGAGTACGGTAAAAATCAGGGTGTTAAAG
TTACGGTAACGCAGGTGAAATAA

Upstream 100 bases:

>100_bases
ATGAGATCCCAGCTCTACACTGGGATCTGCCAAAGGGCTGGTCTCCAGCACCACCACCCGCAGCTTAAAGCCGGGGGCGA
TACCCGAACGTCCAGGTTGG

Downstream 100 bases:

>100_bases
TATGAACGATATAGTAAAAAGCGCTTGGGCCTCAGTAAAAATGAATACTGATTTTATCTGTGTTGACACCTATTCTGGCT
ATAGGAGTAATCAGTTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Adhesin; Filamentous Hemagglutinin Outer Membrane Protein

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSSLGADVMSSEEAKAYVQQWNGQDLSKIDVNSPGWTKFAAFASDPENQVAVASLGMLGKDLTKAALSYMGRNTSTATVS
ASSVGMKWGQGNMKQGMPWEDYVGKTLPVGSRLPPNFKTYDYFDRATGAVVSAKSLDTQTMAKLSNPNQVYSSIKKNIDV
TAKFEKASLSGVTVNSSMITSKEVRLAVPVNTTKAQWTEINRAIEYGKNQGVKVTVTQVK

Sequences:

>Translated_220_residues
MSSLGADVMSSEEAKAYVQQWNGQDLSKIDVNSPGWTKFAAFASDPENQVAVASLGMLGKDLTKAALSYMGRNTSTATVS
ASSVGMKWGQGNMKQGMPWEDYVGKTLPVGSRLPPNFKTYDYFDRATGAVVSAKSLDTQTMAKLSNPNQVYSSIKKNIDV
TAKFEKASLSGVTVNSSMITSKEVRLAVPVNTTKAQWTEINRAIEYGKNQGVKVTVTQVK
>Mature_219_residues
SSLGADVMSSEEAKAYVQQWNGQDLSKIDVNSPGWTKFAAFASDPENQVAVASLGMLGKDLTKAALSYMGRNTSTATVSA
SSVGMKWGQGNMKQGMPWEDYVGKTLPVGSRLPPNFKTYDYFDRATGAVVSAKSLDTQTMAKLSNPNQVYSSIKKNIDVT
AKFEKASLSGVTVNSSMITSKEVRLAVPVNTTKAQWTEINRAIEYGKNQGVKVTVTQVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23739; Mature: 23608

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLGADVMSSEEAKAYVQQWNGQDLSKIDVNSPGWTKFAAFASDPENQVAVASLGMLGK
CCCCCCHHHCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCCCCEEHHHHHHHHH
DLTKAALSYMGRNTSTATVSASSVGMKWGQGNMKQGMPWEDYVGKTLPVGSRLPPNFKTY
HHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
DYFDRATGAVVSAKSLDTQTMAKLSNPNQVYSSIKKNIDVTAKFEKASLSGVTVNSSMIT
CHHHHHCCCEEECCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCEEE
SKEVRLAVPVNTTKAQWTEINRAIEYGKNQGVKVTVTQVK
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
SSLGADVMSSEEAKAYVQQWNGQDLSKIDVNSPGWTKFAAFASDPENQVAVASLGMLGK
CCCCCHHHCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCCCCEEHHHHHHHHH
DLTKAALSYMGRNTSTATVSASSVGMKWGQGNMKQGMPWEDYVGKTLPVGSRLPPNFKTY
HHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
DYFDRATGAVVSAKSLDTQTMAKLSNPNQVYSSIKKNIDVTAKFEKASLSGVTVNSSMIT
CHHHHHCCCEEECCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCEEE
SKEVRLAVPVNTTKAQWTEINRAIEYGKNQGVKVTVTQVK
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA