| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948569
Identifier: 153948569
GI number: 153948569
Start: 3313032
End: 3313556
Strand: Reverse
Name: 153948569
Synonym: YpsIP31758_2938
Alternate gene names: NA
Gene position: 3313556-3313032 (Counterclockwise)
Preceding gene: 153950432
Following gene: 153948970
Centisome position: 70.15
GC content: 39.05
Gene sequence:
>525_bases ATGAATGAAACAGAAATTTACGGTATCTATGACAGTGACTTTAACCTGATGTTTGAAAACGCCATTAATATGAAAGCCAG TGTTTTTGAAGGCTCTAAGCTAATGGAACACCCCATCGAAGACGGCTCGACTAAAACTGACCACAAAATAATTCTTCCTG TCGAAATAGAAATTATATTATGGATATCGGAAGCGCATTATAAAGACACGTACTCTGTAATTAAACAGGCTTTGTATAGT GACTCCAGCTTTCAAGTTAATACTCGCGTTGGAATTTATTCCAATATGATTTTATCTGAGATGCCGCATGAAGAATCACC CGATCAATCCGGTGCTATTATCATTACGTTGAGTTTGAAAGAGGCTGTTATTGTCACTACGCAATATCAAGCGTTAACGC CAAGAAAAGTAAAAGACTCAAAGGATACAAGCACCGTAAATCGCGGGGAACAAAAGCCGCAGAAATCAGATAGAACCCTT TTGGATGTAGCGGCGCATGCTGTCGGAGGTTATTTTGGAAAATAG
Upstream 100 bases:
>100_bases AAGTGATCACGCAGGCGACGGACGCGGAAGGGATCGCGCGGGACATCGGCAGTGAATATGGTAATGCAATGAGTCAGTAC GCTGACGGGTTGGAAATATA
Downstream 100 bases:
>100_bases CATGATTCAGTTAATTGGTTTGGAATCAGTAGCGAACCAATCATTAACGATCCGACTTGAAAACTCACGTTATGAAATAG TATTGAATACGTTGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related-Protein
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEIILWISEAHYKDTYSVIKQALYS DSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLKEAVIVTTQYQALTPRKVKDSKDTSTVNRGEQKPQKSDRTL LDVAAHAVGGYFGK
Sequences:
>Translated_174_residues MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEIILWISEAHYKDTYSVIKQALYS DSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLKEAVIVTTQYQALTPRKVKDSKDTSTVNRGEQKPQKSDRTL LDVAAHAVGGYFGK >Mature_174_residues MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEIILWISEAHYKDTYSVIKQALYS DSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLKEAVIVTTQYQALTPRKVKDSKDTSTVNRGEQKPQKSDRTL LDVAAHAVGGYFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19538; Mature: 19538
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEIIL CCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEEEEEEE WISEAHYKDTYSVIKQALYSDSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLK EEECCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEECC EAVIVTTQYQALTPRKVKDSKDTSTVNRGEQKPQKSDRTLLDVAAHAVGGYFGK CEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEIIL CCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEEEEEEE WISEAHYKDTYSVIKQALYSDSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLK EEECCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEECC EAVIVTTQYQALTPRKVKDSKDTSTVNRGEQKPQKSDRTLLDVAAHAVGGYFGK CEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA