| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950432
Identifier: 153950432
GI number: 153950432
Start: 3313556
End: 3314104
Strand: Reverse
Name: 153950432
Synonym: YpsIP31758_2939
Alternate gene names: NA
Gene position: 3314104-3313556 (Counterclockwise)
Preceding gene: 153949930
Following gene: 153948569
Centisome position: 70.16
GC content: 48.45
Gene sequence:
>549_bases ATGTTCACCGAGCCGATGATGTTTCTTGAAGATGCGAAAAATGGAGTGAAAGAATTACTGGATTCCATTTTTTGGGACGG TGCGGGTGACACTATCTTTAGCTTTCTGAGTAACGCAGGCTGGGTGTTATCGGCTCTGTGGAAGGGCCTTTTGACACTCA TTGATAATGTTATTACACGTGCACTCGGGGGGTTTGAGTCTATCGGTAATGCATGGAAGACTGTGAAGGGCTGGTTTGGC GCAGGTGAAGAAGAGGTCAATAACGCTAAAAATATAGCAACGGCTGGGCAGTCGCGGCAAGGGTGGGAAGAGCCTGTAGA CTTAACTTACGGCGGCAAGGAGCAACTGGCGCAGGCATCAGCAAGCAGCGTAACGACAATGACGAGCAGCAGCATTACTA ACAGCAAAGCAGCGAATAAAAATATTAATAATCGCGTCGATAAAATAGAAGTGATCACGCAGGCGACGGACGCGGAAGGG ATCGCGCGGGACATCGGCAGTGAATATGGTAATGCAATGAGTCAGTACGCTGACGGGTTGGAAATATAA
Upstream 100 bases:
>100_bases GTCATGCGCAGTACGACTAGCGAAGAGATTTCCTAAACTGGCGGTAGCTCTTGAGTTAGTAAGACAGGGGGCGGTGATAT TGAAGGAGACACTGGTAAGG
Downstream 100 bases:
>100_bases TGAATGAAACAGAAATTTACGGTATCTATGACAGTGACTTTAACCTGATGTTTGAAAACGCCATTAATATGAAAGCCAGT GTTTTTGAAGGCTCTAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MFTEPMMFLEDAKNGVKELLDSIFWDGAGDTIFSFLSNAGWVLSALWKGLLTLIDNVITRALGGFESIGNAWKTVKGWFG AGEEEVNNAKNIATAGQSRQGWEEPVDLTYGGKEQLAQASASSVTTMTSSSITNSKAANKNINNRVDKIEVITQATDAEG IARDIGSEYGNAMSQYADGLEI
Sequences:
>Translated_182_residues MFTEPMMFLEDAKNGVKELLDSIFWDGAGDTIFSFLSNAGWVLSALWKGLLTLIDNVITRALGGFESIGNAWKTVKGWFG AGEEEVNNAKNIATAGQSRQGWEEPVDLTYGGKEQLAQASASSVTTMTSSSITNSKAANKNINNRVDKIEVITQATDAEG IARDIGSEYGNAMSQYADGLEI >Mature_182_residues MFTEPMMFLEDAKNGVKELLDSIFWDGAGDTIFSFLSNAGWVLSALWKGLLTLIDNVITRALGGFESIGNAWKTVKGWFG AGEEEVNNAKNIATAGQSRQGWEEPVDLTYGGKEQLAQASASSVTTMTSSSITNSKAANKNINNRVDKIEVITQATDAEG IARDIGSEYGNAMSQYADGLEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19583; Mature: 19583
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTEPMMFLEDAKNGVKELLDSIFWDGAGDTIFSFLSNAGWVLSALWKGLLTLIDNVITR CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALGGFESIGNAWKTVKGWFGAGEEEVNNAKNIATAGQSRQGWEEPVDLTYGGKEQLAQAS HHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH ASSVTTMTSSSITNSKAANKNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC EI CC >Mature Secondary Structure MFTEPMMFLEDAKNGVKELLDSIFWDGAGDTIFSFLSNAGWVLSALWKGLLTLIDNVITR CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALGGFESIGNAWKTVKGWFGAGEEEVNNAKNIATAGQSRQGWEEPVDLTYGGKEQLAQAS HHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH ASSVTTMTSSSITNSKAANKNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC EI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA