| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is gspK [C]
Identifier: 153948514
GI number: 153948514
Start: 1148411
End: 1149367
Strand: Direct
Name: gspK [C]
Synonym: YpsIP31758_0959
Alternate gene names: 153948514
Gene position: 1148411-1149367 (Clockwise)
Preceding gene: 153948050
Following gene: 153947327
Centisome position: 24.31
GC content: 30.72
Gene sequence:
>957_bases GTGAATCAAAATGGCATTGCATTACTAATGGTTTTATGTGCACTATTTTTGATGAGTACAATGGTAATGACATCATATCA CTATTGGTTCGATATCTATTATCTGGCAAAAAATAGTCAGCAACGGCAGAAAGAAAAATGGATATTACTCGGTGCCGAAG AGAAATTTGTGAGTGAATTAATAAAAAACATTTCAGATGATAGATTCAATAATAATAATTTTAGACGTTTAATATCAGGG GGAAGGGTTACATCGGGTACATGGAACGTTAACCTTAAATCAATCGATAATACAAACTGTTTTAACATTAATGCATTAAA AACTAAAATTTCCAATCCCGAAGAAATCATTGAAACTTATTCATGGCAGGTTTTTAAACACTTGTTGTTAATTAGCGGTG TAGGAGTGCAAGAAACACAGGATACCCTGGACAGAGTGGTTGAGTTATATCGTTCAAACCTCATTATTGAACAGGGTAAT AATGGGTTGTCAACATTAAAATATATTTCATATGAGGTAGATGAAATTAATATTTCATCTAAAATGAATCGTGCTGATTT TTTAAAAATAGCACCAATGCTTTGTATCCGACGTGATAAAAAATTATTAGTTAACATCAATATGCTAGATGTGGGAAATA ATCAGTATCTGCAAGCTGCTTTGCTTAATACAGTCAGTGAAAGGGATATTTATGATGTTATTTCAGCAAAACCTAATAAT GGGTGGGATAACGTTTTTATATTCTATAATTTATTGTCATCGCATTCAACCATGAGCGGTAGAAATGTAAATAAAAATAT TTTAGATAAATTAACCGTAGATGAATATTTTATTAATTATATATTTAGAATCGATCATGAAGATAGTTATTATCAACTGA TTACTTTTATCCATGCTGTAGGTAAGTCAATAGCTATTTTAAACCGGAGATACAGTTTTAGTGAGCAACATCATTGA
Upstream 100 bases:
>100_bases GTAGGATTGACCTTTCTCCACAAGCCATTGAAATCACCCTTGATGTTAAAAGTGTTGGGGTGATTAGGCGATTTATTCTA TTGCTACATTAGGAAGCGCT
Downstream 100 bases:
>100_bases TGACGTGAAATTAACCTTCACACTCCTTATTCGACTAGGGGAAACAGAATTTGAACCTATCTATTGGTATGTTGAATCAC AGGGAAAGAAATTAGTCAGA
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNQNGIALLMVLCALFLMSTMVMTSYHYWFDIYYLAKNSQQRQKEKWILLGAEEKFVSELIKNISDDRFNNNNFRRLISG GRVTSGTWNVNLKSIDNTNCFNINALKTKISNPEEIIETYSWQVFKHLLLISGVGVQETQDTLDRVVELYRSNLIIEQGN NGLSTLKYISYEVDEINISSKMNRADFLKIAPMLCIRRDKKLLVNINMLDVGNNQYLQAALLNTVSERDIYDVISAKPNN GWDNVFIFYNLLSSHSTMSGRNVNKNILDKLTVDEYFINYIFRIDHEDSYYQLITFIHAVGKSIAILNRRYSFSEQHH
Sequences:
>Translated_318_residues MNQNGIALLMVLCALFLMSTMVMTSYHYWFDIYYLAKNSQQRQKEKWILLGAEEKFVSELIKNISDDRFNNNNFRRLISG GRVTSGTWNVNLKSIDNTNCFNINALKTKISNPEEIIETYSWQVFKHLLLISGVGVQETQDTLDRVVELYRSNLIIEQGN NGLSTLKYISYEVDEINISSKMNRADFLKIAPMLCIRRDKKLLVNINMLDVGNNQYLQAALLNTVSERDIYDVISAKPNN GWDNVFIFYNLLSSHSTMSGRNVNKNILDKLTVDEYFINYIFRIDHEDSYYQLITFIHAVGKSIAILNRRYSFSEQHH >Mature_318_residues MNQNGIALLMVLCALFLMSTMVMTSYHYWFDIYYLAKNSQQRQKEKWILLGAEEKFVSELIKNISDDRFNNNNFRRLISG GRVTSGTWNVNLKSIDNTNCFNINALKTKISNPEEIIETYSWQVFKHLLLISGVGVQETQDTLDRVVELYRSNLIIEQGN NGLSTLKYISYEVDEINISSKMNRADFLKIAPMLCIRRDKKLLVNINMLDVGNNQYLQAALLNTVSERDIYDVISAKPNN GWDNVFIFYNLLSSHSTMSGRNVNKNILDKLTVDEYFINYIFRIDHEDSYYQLITFIHAVGKSIAILNRRYSFSEQHH
Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36965; Mature: 36965
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS01319 RBFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNGIALLMVLCALFLMSTMVMTSYHYWFDIYYLAKNSQQRQKEKWILLGAEEKFVSEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHCCCEEEEECHHHHHHHH IKNISDDRFNNNNFRRLISGGRVTSGTWNVNLKSIDNTNCFNINALKTKISNPEEIIETY HHHCCCCCCCCCCHHHHHCCCEEECCEEEEEEEECCCCCCEEEHHHHHCCCCHHHHHHHH SWQVFKHLLLISGVGVQETQDTLDRVVELYRSNLIIEQGNNGLSTLKYISYEVDEINISS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHEEEECEEECCC KMNRADFLKIAPMLCIRRDKKLLVNINMLDVGNNQYLQAALLNTVSERDIYDVISAKPNN CCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC GWDNVFIFYNLLSSHSTMSGRNVNKNILDKLTVDEYFINYIFRIDHEDSYYQLITFIHAV CCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH GKSIAILNRRYSFSEQHH CCHHEEHHCCCCCCCCCC >Mature Secondary Structure MNQNGIALLMVLCALFLMSTMVMTSYHYWFDIYYLAKNSQQRQKEKWILLGAEEKFVSEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHCCCEEEEECHHHHHHHH IKNISDDRFNNNNFRRLISGGRVTSGTWNVNLKSIDNTNCFNINALKTKISNPEEIIETY HHHCCCCCCCCCCHHHHHCCCEEECCEEEEEEEECCCCCCEEEHHHHHCCCCHHHHHHHH SWQVFKHLLLISGVGVQETQDTLDRVVELYRSNLIIEQGNNGLSTLKYISYEVDEINISS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHEEEECEEECCC KMNRADFLKIAPMLCIRRDKKLLVNINMLDVGNNQYLQAALLNTVSERDIYDVISAKPNN CCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC GWDNVFIFYNLLSSHSTMSGRNVNKNILDKLTVDEYFINYIFRIDHEDSYYQLITFIHAV CCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH GKSIAILNRRYSFSEQHH CCHHEEHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA