Click here to switch to the map view.

The map label for this gene is ybjL [C]

Identifier: 153948501

GI number: 153948501

Start: 3002801

End: 3004489

Strand: Direct

Name: ybjL [C]

Synonym: YpsIP31758_2649

Alternate gene names: 153948501

Gene position: 3002801-3004489 (Clockwise)

Preceding gene: 153947544

Following gene: 153948062

Centisome position: 63.57

GC content: 49.26

Gene sequence:

>1689_bases
GTGAATATAAACGTCGCAAATTTATTAAACGGCAACTATATCTTGCTGTTATTCGTCGTCTTAGCGTTGGGGTTATGCTT
AGGTAAATTGCGCCTTGGCTCTATCCAATTAGGTAACGCTATTGGTGTACTGGTGGTATCACTGTTGCTAGGGCAACAGC
ATTTCGCCATCAATACTGAAGCGCTAAATCTGGGCTTTATGTTGTTTATTTTTTGTGTCGGTGTTGAAGCCGGTCCAAAC
TTCTTTTCTATTTTCTTCCGTGATGGCAAAAATTACCTGATGCTCGCCTTGGTTATGGTGGGCAGCGCGATGATTTTAGC
GTTGGGGCTTGGCAAATTATTTGGTTGGGATATCGGTCTGACCGCCGGGATGCTGGCAGGGTCAATGACATCGACCCCCG
TTTTGGTTGGGGCCGGTGATACGCTACGCCATACCATGGCTAATGGTTCGTCACTGCAACAAGCACAGGATAATTTGAGC
CTCGGCTATGCCCTGACTTATCTTATCGGGCTGGTTAGCCTGATTTTAGGTGCGCGCTATTTACCTAAGCTTCAGCATCA
GGATTTACCGACCAGCGCCCAACAAATTGCCCGCGAACGAGGGCTGGACACCGATAGCCAGCGTAAAGTGTATTTGCCTG
TCATCCGTGCTTATCGTGTAGGCCCGGAGCTGGTTGCCTGGGCAGATGGTAAAAACTTGCGTGAATTAGGGATTTACCGC
CAAACCGGTTGCTATATCGAGCGTATCCGCCGCAACGGTATTCTCGCGAATCCGGATGGTGACGCCGTGCTACAAGTCGG
TGATGAAATCTCGTTGGTGGGTTACCCAGATGCCCATTCCCGCCTTGACCCCAGCTTCCGTAATGGCAAAGAAGTTTTCG
ACCGTGATCTGTTGGATATGCGTATCGTCACCGAAGAGATCGTGGTCAAAAATAGCAATGCTGTCGGTAAACGCCTCAGC
CATTTAAAACTCACCGATCACGGTTGCTTCCTTAATCGGGTCATTCGTAGCCAAATTGAAATGCCCATTGATGATAACGT
GGTGTTGAATAAAGGTGATGTGCTGCAAGTCAGTGGTGATGCCCGGCGAGTCAAAAGCGTGGCAGAAAAAATTGGCTTTA
TCTCTATTCACAGTCAGGTCACTGACCTGCTGGCCTTCTGCTCATTCTTTATTCTTGGGTTAATGATTGGCCTGATTACT
TTCCAGTTCAGCAATTTCAGCTTCGGTATTGGCAATGCCGCAGGGCTGTTATTAGCAGGGATCATGCTGGGATTTTTACG
TGCCAACCACCCTACTTTTGGCTATATCCCGCAAGGCGCCTTGAATATGGTGAAAGAGTTCGGGTTAATGGTCTTTATGG
CAGGTGTCGGGTTAAGTGCCGGGGGCGGCATTAATAGCAGCCTGGGCGCCGTCGGTGGACAAATGTTGATTTCCGGTTTG
ATAGTCAGTTTGGTTCCGGTGGTGATCTGCTTTGTTTTTGGTGCTTATGTTCTGCGTATGAACCGTGCACTGCTTTTTGG
TGCCATTATGGGGGCCAGAACCTGTGCACCCGCCATGGACATCATCAGTGATACCGCGCGTAGCAATATTCCCGCATTAG
GCTACGCGGGGACTTACGCTATCGCCAACGTCTTACTGACCTTGGCTGGCTCGTTGATTGTCATCCTCTGGCCGGGGATA
TTAGGTTAG

Upstream 100 bases:

>100_bases
CGTTCTCTCTGGTTATGGAAGAACGGGTGCATAGTGAATCATTTAGATTTAACTATCCTAGACTTAATAAAAAGTCATAC
TTTGTGAATATAAACATCCT

Downstream 100 bases:

>100_bases
ATAAAAGAGGCCCGGGATAAATCTAAATACTATTTTATCCTTTTTTCATTTCCCCCGAACTTTCTTATCAGGCGGGGGTC
TGAATTAATGCCACTGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MNINVANLLNGNYILLLFVVLALGLCLGKLRLGSIQLGNAIGVLVVSLLLGQQHFAINTEALNLGFMLFIFCVGVEAGPN
FFSIFFRDGKNYLMLALVMVGSAMILALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHTMANGSSLQQAQDNLS
LGYALTYLIGLVSLILGARYLPKLQHQDLPTSAQQIARERGLDTDSQRKVYLPVIRAYRVGPELVAWADGKNLRELGIYR
QTGCYIERIRRNGILANPDGDAVLQVGDEISLVGYPDAHSRLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNSNAVGKRLS
HLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKSVAEKIGFISIHSQVTDLLAFCSFFILGLMIGLIT
FQFSNFSFGIGNAAGLLLAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGGGINSSLGAVGGQMLISGL
IVSLVPVVICFVFGAYVLRMNRALLFGAIMGARTCAPAMDIISDTARSNIPALGYAGTYAIANVLLTLAGSLIVILWPGI
LG

Sequences:

>Translated_562_residues
MNINVANLLNGNYILLLFVVLALGLCLGKLRLGSIQLGNAIGVLVVSLLLGQQHFAINTEALNLGFMLFIFCVGVEAGPN
FFSIFFRDGKNYLMLALVMVGSAMILALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHTMANGSSLQQAQDNLS
LGYALTYLIGLVSLILGARYLPKLQHQDLPTSAQQIARERGLDTDSQRKVYLPVIRAYRVGPELVAWADGKNLRELGIYR
QTGCYIERIRRNGILANPDGDAVLQVGDEISLVGYPDAHSRLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNSNAVGKRLS
HLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKSVAEKIGFISIHSQVTDLLAFCSFFILGLMIGLIT
FQFSNFSFGIGNAAGLLLAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGGGINSSLGAVGGQMLISGL
IVSLVPVVICFVFGAYVLRMNRALLFGAIMGARTCAPAMDIISDTARSNIPALGYAGTYAIANVLLTLAGSLIVILWPGI
LG
>Mature_562_residues
MNINVANLLNGNYILLLFVVLALGLCLGKLRLGSIQLGNAIGVLVVSLLLGQQHFAINTEALNLGFMLFIFCVGVEAGPN
FFSIFFRDGKNYLMLALVMVGSAMILALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHTMANGSSLQQAQDNLS
LGYALTYLIGLVSLILGARYLPKLQHQDLPTSAQQIARERGLDTDSQRKVYLPVIRAYRVGPELVAWADGKNLRELGIYR
QTGCYIERIRRNGILANPDGDAVLQVGDEISLVGYPDAHSRLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNSNAVGKRLS
HLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKSVAEKIGFISIHSQVTDLLAFCSFFILGLMIGLIT
FQFSNFSFGIGNAAGLLLAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGGGINSSLGAVGGQMLISGL
IVSLVPVVICFVFGAYVLRMNRALLFGAIMGARTCAPAMDIISDTARSNIPALGYAGTYAIANVLLTLAGSLIVILWPGI
LG

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI1787071, Length=560, Percent_Identity=90.1785714285714, Blast_Score=1034, Evalue=0.0,
Organism=Escherichia coli, GI87082315, Length=530, Percent_Identity=24.5283018867925, Blast_Score=139, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1326_YERPE (Q8ZGH1)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AI0161
- RefSeq:   NP_670157.1
- RefSeq:   NP_992632.1
- RefSeq:   YP_002346351.1
- ProteinModelPortal:   Q8ZGH1
- IntAct:   Q8ZGH1
- GeneID:   1147804
- GeneID:   1174168
- GeneID:   2764922
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1326
- KEGG:   ypk:y2857
- KEGG:   ypm:YP_1266
- HOGENOM:   HBG298447
- OMA:   DHLSLGY
- ProtClustDB:   PRK04972
- BioCyc:   YPES187410:Y2857-MONOMER
- BioCyc:   YPES214092:YPO1326-MONOMER
- HAMAP:   MF_01015
- InterPro:   IPR006037
- InterPro:   IPR023017
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 60231; Mature: 60231

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21815ec0)-; HASH(0x214f8148)-; HASH(0x21771db0)-; HASH(0x21a11f94)-; HASH(0x21b2fd30)-; HASH(0x21c60bb4)-; HASH(0x215bd034)-; HASH(0x218c4f20)-; HASH(0x1c8d7ce8)-; HASH(0x2113096c)-; HASH(0x21aed1cc)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINVANLLNGNYILLLFVVLALGLCLGKLRLGSIQLGNAIGVLVVSLLLGQQHFAINTE
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCEEEEHH
ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSAMILALGLGKLFGWDIGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TAGMLAGSMTSTPVLVGAGDTLRHTMANGSSLQQAQDNLSLGYALTYLIGLVSLILGARY
HHHHHHCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LPKLQHQDLPTSAQQIARERGLDTDSQRKVYLPVIRAYRVGPELVAWADGKNLRELGIYR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCEEEECCCCCHHHHCCHH
QTGCYIERIRRNGILANPDGDAVLQVGDEISLVGYPDAHSRLDPSFRNGKEVFDRDLLDM
HCCHHHHHHHHCCEEECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
RIVTEEIVVKNSNAVGKRLSHLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD
HHHHHHHHEECCCHHHHHHHHCEECCCHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCH
ARRVKSVAEKIGFISIHSQVTDLLAFCSFFILGLMIGLITFQFSNFSFGIGNAAGLLLAG
HHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
IMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGGGINSSLGAVGGQMLISGL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
IVSLVPVVICFVFGAYVLRMNRALLFGAIMGARTCAPAMDIISDTARSNIPALGYAGTYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IANVLLTLAGSLIVILWPGILG
HHHHHHHHHCCCEEEECCCCCH
>Mature Secondary Structure
MNINVANLLNGNYILLLFVVLALGLCLGKLRLGSIQLGNAIGVLVVSLLLGQQHFAINTE
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCEEEEHH
ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSAMILALGLGKLFGWDIGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TAGMLAGSMTSTPVLVGAGDTLRHTMANGSSLQQAQDNLSLGYALTYLIGLVSLILGARY
HHHHHHCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LPKLQHQDLPTSAQQIARERGLDTDSQRKVYLPVIRAYRVGPELVAWADGKNLRELGIYR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCEEEECCCCCHHHHCCHH
QTGCYIERIRRNGILANPDGDAVLQVGDEISLVGYPDAHSRLDPSFRNGKEVFDRDLLDM
HCCHHHHHHHHCCEEECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
RIVTEEIVVKNSNAVGKRLSHLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD
HHHHHHHHEECCCHHHHHHHHCEECCCHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCH
ARRVKSVAEKIGFISIHSQVTDLLAFCSFFILGLMIGLITFQFSNFSFGIGNAAGLLLAG
HHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
IMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGGGINSSLGAVGGQMLISGL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
IVSLVPVVICFVFGAYVLRMNRALLFGAIMGARTCAPAMDIISDTARSNIPALGYAGTYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IANVLLTLAGSLIVILWPGILG
HHHHHHHHHCCCEEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430