Click here to switch to the map view.

The map label for this gene is 153948294

Identifier: 153948294

GI number: 153948294

Start: 4451963

End: 4452568

Strand: Reverse

Name: 153948294

Synonym: YpsIP31758_3970

Alternate gene names: NA

Gene position: 4452568-4451963 (Counterclockwise)

Preceding gene: 153947846

Following gene: 153947033

Centisome position: 94.27

GC content: 51.65

Gene sequence:

>606_bases
ATGTATCAGGTGAATTTCTTGCCGTGGCGTATTGCCCGGCAACAGGCTCGCTACCGGTTCTGGCGCAATACCATGCTGAT
CCAAGGTATTGGCTTGGCTCTCTATCTGGTGGTGGTGCTAATGCAGGCCCGCAGTGAACACAAACACCGGCAAGGCACGG
CGGCGGCATTATCACAGCAGCAGGCTGCATTAAGCCAACGTCAACAGCAAGTGCAGCAGGCAATGGCGCAGTTGCAGCGG
ATAAAACAGCATATTCAGCGCTACCATCAGGCTCATCAACCTGCCCGAGGTTACTCCATATTATTGCAACAGCTATCACA
GCAGATCCCTGAACGTTGCTGGCTGATGGCCCTAAGGCAGCAAGGTGATGTGCTGTCTTTCGAGGTTATTAGCTGGGATT
ACGCCACAATTAATGCATTTTTAGCGATGTTAGGCCGTCAGCCTCTTTTGGTTAATGTGAGCTTGCAGGGGATTACTCAA
CAGGATGAGGGCGGTTTTCGTTTCGTGGTGCATGCCTCTTGGCGGGACGAAAACCATCATGTAGAAGGCCATCATGCAGA
AGGCCATGATATCGACGGTCATCATGTGGCAGGGGACTATGAATAA

Upstream 100 bases:

>100_bases
ATCAACCCCCATTACCCGCGTTACCGGCAGCTTTTACTTTGGCCGGGGGGCTGGCGGTACGTGCGGCAGACTCTTTATCT
GCTGCGGGTGCGGGCTACTG

Downstream 100 bases:

>100_bases
ATCATTACAGCGTTGTATGGATAGGCCAGGTTGGCAGCTTTGTTTATGGCAGTGGTTTTTTTTAAGCCTGCTCGGGGTTA
TCGCTTACGGTGGGTTACTG

Product: fimbrial assembly protein PilN

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MYQVNFLPWRIARQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQQAALSQRQQQVQQAMAQLQR
IKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQQGDVLSFEVISWDYATINAFLAMLGRQPLLVNVSLQGITQ
QDEGGFRFVVHASWRDENHHVEGHHAEGHDIDGHHVAGDYE

Sequences:

>Translated_201_residues
MYQVNFLPWRIARQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQQAALSQRQQQVQQAMAQLQR
IKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQQGDVLSFEVISWDYATINAFLAMLGRQPLLVNVSLQGITQ
QDEGGFRFVVHASWRDENHHVEGHHAEGHDIDGHHVAGDYE
>Mature_201_residues
MYQVNFLPWRIARQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQQAALSQRQQQVQQAMAQLQR
IKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQQGDVLSFEVISWDYATINAFLAMLGRQPLLVNVSLQGITQ
QDEGGFRFVVHASWRDENHHVEGHHAEGHDIDGHHVAGDYE

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23321; Mature: 23321

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQVNFLPWRIARQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAALSQRQQQVQQAMAQLQRIKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QGDVLSFEVISWDYATINAFLAMLGRQPLLVNVSLQGITQQDEGGFRFVVHASWRDENHH
CCCEEEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC
VEGHHAEGHDIDGHHVAGDYE
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYQVNFLPWRIARQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAALSQRQQQVQQAMAQLQRIKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QGDVLSFEVISWDYATINAFLAMLGRQPLLVNVSLQGITQQDEGGFRFVVHASWRDENHH
CCCEEEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC
VEGHHAEGHDIDGHHVAGDYE
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA