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The map label for this gene is yrfD [C]

Identifier: 153947846

GI number: 153947846

Start: 4452568

End: 4453464

Strand: Reverse

Name: yrfD [C]

Synonym: YpsIP31758_3971

Alternate gene names: 153947846

Gene position: 4453464-4452568 (Counterclockwise)

Preceding gene: 153949897

Following gene: 153948294

Centisome position: 94.29

GC content: 52.4

Gene sequence:

>897_bases
ATGTACTCACAATATTGGCAGGTAGGGCTAGATATTCAAATGGAGGCCATCCGAGCGTTGGCCGTGATACGACGCCGTAA
TGGCTGGCAACTGCGCTACTGGTGGCATCAAGTCTTACCTTCTGGCGTTTTGCGGGAAGGCATATTACATCAGCCTGATA
TTCTTAGCGAACAACTCAAATTATTACGTAAACAGCTGCCTCGACATATTTCATTACGTATTGCTTTGCCCGCACAGCGC
ATATTGCAGCACACCATTCATGTGCCGGATAGGCGTCTGCGTGAACCCGAACGTGATGGTTTTATTAAAGCCAGTGCCAG
CAGACTATTTCCGGTTAACAGCCAGGCTTTGGCACTGGATTACTGCCGCGAAACGGTTGCGAGTAGCGAATTATTGATAA
CCGCAGCGCGTCAGTCAGAGGTGCAGCAATGGCAAGCCTGCTTGGAACAGGCGGGTTTATCCTCACAAGTGATTGATATT
GCGCCATGCGCTTTACGTTATATGGCAACAGCGGCCGGTTTATCTGGGCCATATTGGCTGGTTCACCGGTTGGCAAATGA
ATGGCTGTGGGTATCGTCCAGTGACATGCCATTTCATTCCGGGGTGGTGGCTATCGAGACAGAGTGCAGAACGCAGGAAA
ATGATATTCGCTTGCTGTCGGCCCTATTGGCTCAGCTCAACATGCGCGGTGCTGGTGAAGATGGCGCGCCTTTGCCGGTG
TATTACAGCAGTGTAGTAAAGGAGTCGTTGCCGGAAAACACACGGTCTTGGTCGCCGCTAACGGCTTTTGCGCACTATCA
ACCCCCATTACCCGCGTTACCGGCAGCTTTTACTTTGGCCGGGGGGCTGGCGGTACGTGCGGCAGACTCTTTATCTGCTG
CGGGTGCGGGCTACTGA

Upstream 100 bases:

>100_bases
GTCAATTGGGCAGTTTATAAACAACCGCGACGTAGTATAAAGGCAAGCCCGCACCATGGATACGTTCTTTTATTCTGTCT
CGACATGGAGGTCGATAAAG

Downstream 100 bases:

>100_bases
TGTATCAGGTGAATTTCTTGCCGTGGCGTATTGCCCGGCAACAGGCTCGCTACCGGTTCTGGCGCAATACCATGCTGATC
CAAGGTATTGGCTTGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHQVLPSGVLREGILHQPDILSEQLKLLRKQLPRHISLRIALPAQR
ILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDI
APCALRYMATAAGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLPV
YYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY

Sequences:

>Translated_298_residues
MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHQVLPSGVLREGILHQPDILSEQLKLLRKQLPRHISLRIALPAQR
ILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDI
APCALRYMATAAGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLPV
YYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY
>Mature_298_residues
MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHQVLPSGVLREGILHQPDILSEQLKLLRKQLPRHISLRIALPAQR
ILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDI
APCALRYMATAAGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLPV
YYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082257, Length=141, Percent_Identity=26.241134751773, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33240; Mature: 33240

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHQVLPSGVLREGILHQPDILSEQLK
CCCCCEEECCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHHHHCCCCCCHHHHHHHH
LLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALD
HHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCHHHHH
YCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDIAPCALRYMATAAGLSGPYWL
HHHHHHCCCHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
VHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLPV
HHHHHHCEEEECCCCCCHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
YYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY
HHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHEEEHHHHCCCCCCC
>Mature Secondary Structure
MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHQVLPSGVLREGILHQPDILSEQLK
CCCCCEEECCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHHHHCCCCCCHHHHHHHH
LLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALD
HHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCHHHHH
YCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDIAPCALRYMATAAGLSGPYWL
HHHHHHCCCHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
VHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLPV
HHHHHHCEEEECCCCCCHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
YYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY
HHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHEEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA