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The map label for this gene is yafX [H]

Identifier: 153948288

GI number: 153948288

Start: 913506

End: 913937

Strand: Reverse

Name: yafX [H]

Synonym: YpsIP31758_0752

Alternate gene names: 153948288

Gene position: 913937-913506 (Counterclockwise)

Preceding gene: 153950186

Following gene: 153948236

Centisome position: 19.35

GC content: 51.62

Gene sequence:

>432_bases
ATGAACAGCCCCCTCAATACCGAAACAAACGCACTCACCGCCACCCGGGTTTCTGATGCGCAACGCATCCATTTCTGGCC
AAAATACTTTGGTCAGGTACCCAAATGGGCGTTGATTGAACCACAGGTTTTTCGTTGGCTGGACCGGTTGTGTGACGACT
ACCACGGCGACTTTTGGGACTTCTACACCTTGCCCAACGGCGGGGCATTTATGGTGCCGGGCACGGAGCAAGACTATGTG
TTGTTTAACGCGCTCAATGGCAACGGGGCCACCGTCAGTCGTGAAGCTGCGGGTATTACCGCCTGCCTGATGGCTTACAG
TCACCATGCCTGCCGTACTGAAAATGAGTTTATGACTGAACACTTTTACAGATTGCGCGAATATGCCTTACAACATCCTG
AAAGTCGCGCCATTTTTGACTTGATTGACTGA

Upstream 100 bases:

>100_bases
GTAAGCACTTACTCACTTTTACCCCCCCACAAACAGGCTCCCCCGGTTTCCGGTGGGGCCTGTTTTGTTATTAACCGATT
ATGGTACAAGGATTTTTCTC

Downstream 100 bases:

>100_bases
CAAGCAGGAGTTCCCCATGCCACATCAGCCTATGCGTGCTTCACTCCCCACCTTGCCTTTTGCCCAGCAACAGATTATCA
GCCAGGCACTGGCGATACTG

Product: antirestriction ArdB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNSPLNTETNALTATRVSDAQRIHFWPKYFGQVPKWALIEPQVFRWLDRLCDDYHGDFWDFYTLPNGGAFMVPGTEQDYV
LFNALNGNGATVSREAAGITACLMAYSHHACRTENEFMTEHFYRLREYALQHPESRAIFDLID

Sequences:

>Translated_143_residues
MNSPLNTETNALTATRVSDAQRIHFWPKYFGQVPKWALIEPQVFRWLDRLCDDYHGDFWDFYTLPNGGAFMVPGTEQDYV
LFNALNGNGATVSREAAGITACLMAYSHHACRTENEFMTEHFYRLREYALQHPESRAIFDLID
>Mature_143_residues
MNSPLNTETNALTATRVSDAQRIHFWPKYFGQVPKWALIEPQVFRWLDRLCDDYHGDFWDFYTLPNGGAFMVPGTEQDYV
LFNALNGNGATVSREAAGITACLMAYSHHACRTENEFMTEHFYRLREYALQHPESRAIFDLID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antirestriction protein family [H]

Homologues:

Organism=Escherichia coli, GI1786442, Length=143, Percent_Identity=59.4405594405594, Blast_Score=184, Evalue=2e-48,
Organism=Escherichia coli, GI1788996, Length=142, Percent_Identity=57.0422535211268, Blast_Score=179, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004914
- ProDom:   PD012854 [H]

Pfam domain/function: PF03230 Antirestrict [H]

EC number: NA

Molecular weight: Translated: 16544; Mature: 16544

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPLNTETNALTATRVSDAQRIHFWPKYFGQVPKWALIEPQVFRWLDRLCDDYHGDFWD
CCCCCCCCCCCEEEHCCCCCHHEEECHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCEE
FYTLPNGGAFMVPGTEQDYVLFNALNGNGATVSREAAGITACLMAYSHHACRTENEFMTE
EEECCCCCEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
HFYRLREYALQHPESRAIFDLID
HHHHHHHHHHHCCCCCCHHEECC
>Mature Secondary Structure
MNSPLNTETNALTATRVSDAQRIHFWPKYFGQVPKWALIEPQVFRWLDRLCDDYHGDFWD
CCCCCCCCCCCEEEHCCCCCHHEEECHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCEE
FYTLPNGGAFMVPGTEQDYVLFNALNGNGATVSREAAGITACLMAYSHHACRTENEFMTE
EEECCCCCEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
HFYRLREYALQHPESRAIFDLID
HHHHHHHHHHHCCCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]