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The map label for this gene is wzzE [H]

Identifier: 153948268

GI number: 153948268

Start: 206788

End: 207867

Strand: Direct

Name: wzzE [H]

Synonym: YpsIP31758_0183

Alternate gene names: 153948268

Gene position: 206788-207867 (Clockwise)

Preceding gene: 153949704

Following gene: 153950612

Centisome position: 4.38

GC content: 48.33

Gene sequence:

>1080_bases
GTGATGAAACCAGAATCTATGTCGACTGATAAAACAGGGTCTACCAATAATGAACCGTCTGTGGATAACGAATTAGATAT
CCGTGGTCTGTGTCGTACTCTATGGCGTGGCAAGGTATGGATTATCGGTATGGCCATTATTTTCGCTGCGATTGCACTGG
GAGTCTCCTATCTGGTGAAACAGCAGTGGAGTGCGACAGCCATTACTGACAAACCAACCGTCAACAATTTGGGGGGGTAT
TATTCGCAACAGCAGTTTTTACGTAATCTTGATATCCGTCTCAATAGCGGGCTTGTCAGTGAACAGCCAGGCATCTCCGA
TGAAGCTTACGGTGAGTTCATTACTCAGTTAGCGGCTTACGATACCCGTCGTGATTTCTGGCTACAAAGCGATTACTACA
AGCAACGGCTTGAGGGAGACGCTAAGGCGGATGCGGCATTACTCGATGAGCTAGTGAATAACATTGTTTTCACGGCGCGT
GATGATAAAAAAATCCCGAATGACAGCATTAAATTGACGGCAGAAACGGCCAGTGATGCGAATAAGCTACTGCGTGGTTA
CATTGATTTTGCCAGTCAACGTGCGTCAAGCCACCTGAATGATGAAATTCAAGGCGCTTGGGCAGCGCGGACTCAATCAA
TGAAAGCGCAGGTTAAACGTCAGGAAGCGGTAGCTCAAGCAGTCTTTGATCGTGAAGTGGCGGCGGTTAAGCAAGCATTG
AAAGTGGCTGGGCAACAAGGTATTACCCGTAGCCAGACAGATACGCCAGCCGAGCAATTGGCAGATTCCAAGATGTTCAT
GCTAGGTAAGCCGATGCTTGAAGCCCGTTTAGAAACATTACTGGCTACTGGCCCAAGTTTTGATATTGATTATGATCAAA
ACCGTGCCATGCTGGCAACATTGAACGTTGGTCCGACACTAGATGATAAATTCCAGACTTACCGCTACTTACGTACACCA
GAAGACCCGGTTACCCGTGATAGCCCACGTCGTGTGTTCCTGCTGATTATGTGGGGCGCTATCGGGGCATTAGTCGGTGC
GGGTGTGGTATTGGTTCGCCGCTCCAGTAAGGCACTGTGA

Upstream 100 bases:

>100_bases
AACGGGCATGGCGGGTGGCGCGTTTTATCAAACGTTTCAAGCGTCGGATGCGGCGGGCATCGAAAAATAAGCATGAATCT
TAACCAGAGGCTTTTAGGCA

Downstream 100 bases:

>100_bases
CCTGTATGGCCGGTGTCATGTGGAATCAGTAACGGCATGTGTCAGTAACGACACATGATCGGCCATCGTATGTAATCAGT
AGTTGTATGTAATCGATAGT

Product: lipopolysaccharide biosynthesis protein WzzE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MMKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGY
YSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTAR
DDKKIPNDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQAL
KVAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTP
EDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL

Sequences:

>Translated_359_residues
MMKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGY
YSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTAR
DDKKIPNDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQAL
KVAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTP
EDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL
>Mature_359_residues
MMKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGY
YSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTAR
DDKKIPNDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQAL
KVAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTP
EDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082332, Length=336, Percent_Identity=68.4523809523809, Blast_Score=496, Evalue=1e-142,
Organism=Escherichia coli, GI87082029, Length=352, Percent_Identity=25, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786802, Length=353, Percent_Identity=23.5127478753541, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 39888; Mature: 39888

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QQWSATAITDKPTVNNLGGYYSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAY
HCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH
DTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPNDSIKLTAETASDA
CCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHH
NKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQAL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLAT
HHHHHCCCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
LNVGPTLDDKFQTYRYLRTPEDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL
ECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MMKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QQWSATAITDKPTVNNLGGYYSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAY
HCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH
DTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPNDSIKLTAETASDA
CCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHH
NKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQAL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLAT
HHHHHCCCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
LNVGPTLDDKFQTYRYLRTPEDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL
ECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]