| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948080
Identifier: 153948080
GI number: 153948080
Start: 2547645
End: 2548238
Strand: Reverse
Name: 153948080
Synonym: YpsIP31758_2240
Alternate gene names: NA
Gene position: 2548238-2547645 (Counterclockwise)
Preceding gene: 153949395
Following gene: 153950118
Centisome position: 53.95
GC content: 44.44
Gene sequence:
>594_bases ATGGCACAGTATAGTTTTACTAAGTCCGCTGGTGGGATCTTGGTACCGGCCACGCCGGATGCTGAGAGTTTTGTCAAAAA TACCCGGCTGGGGACTATTGTCACCGGTGAGTTTAAGCGTGTACGCAATGCACCATTTCATCGTAAGTTCTTCTCTCTGC TTAATTTAGGTTTCGAATACTGGGAACCCAGTGGTGGTGCGATATCTCCCTTTGAGCTTCAATTCCTGCGTGGCTACATA AACCGGCTGATGGCATATGTTGGTAATAAAGGCGTACTTCATGAAATAGCTGATGATTATCTGGCTCTTGTGGCCGGTAA ACGAGCTGCTAATTTATCAACCGTAAAATCATTCCATGCTTTCCGTCGCTGGGTAACGGTCGAAGCTGGTCACTATGACC TTTTTGAATTACCCGACGGTTCAACACTACGGGAACCACGTTCTATTTCATTTTCTGCAATGGATGAACTGGAATTCAAC GATTTATACAAATCAACACTGAATGTTCTGTGGACTTTCATTCTCAGTAAATCCTTCAATAATCCATTTGAGGTGGAAAA TGCCGCCAGTCAACTCATGAGTTATGCGGCTTAG
Upstream 100 bases:
>100_bases ATCTTATCTTCGTGAGTGAATCTGCTATTATATATATCGGGCTGAACACCCGAAAACCTAAACGTCGTACTGCTGTGCTA TATATCCGGGGGGTGTGGAC
Downstream 100 bases:
>100_bases GGGGAACTATGGCTAATTTACGTGAAGAGGCGAGAGGGCGTGAGTGCCAGATCCGCATACCTGGAATATGCAATAGCGAT ATTGAAACGGTGGTACTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAQYSFTKSAGGILVPATPDAESFVKNTRLGTIVTGEFKRVRNAPFHRKFFSLLNLGFEYWEPSGGAISPFELQFLRGYI NRLMAYVGNKGVLHEIADDYLALVAGKRAANLSTVKSFHAFRRWVTVEAGHYDLFELPDGSTLREPRSISFSAMDELEFN DLYKSTLNVLWTFILSKSFNNPFEVENAASQLMSYAA
Sequences:
>Translated_197_residues MAQYSFTKSAGGILVPATPDAESFVKNTRLGTIVTGEFKRVRNAPFHRKFFSLLNLGFEYWEPSGGAISPFELQFLRGYI NRLMAYVGNKGVLHEIADDYLALVAGKRAANLSTVKSFHAFRRWVTVEAGHYDLFELPDGSTLREPRSISFSAMDELEFN DLYKSTLNVLWTFILSKSFNNPFEVENAASQLMSYAA >Mature_196_residues AQYSFTKSAGGILVPATPDAESFVKNTRLGTIVTGEFKRVRNAPFHRKFFSLLNLGFEYWEPSGGAISPFELQFLRGYIN RLMAYVGNKGVLHEIADDYLALVAGKRAANLSTVKSFHAFRRWVTVEAGHYDLFELPDGSTLREPRSISFSAMDELEFND LYKSTLNVLWTFILSKSFNNPFEVENAASQLMSYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22171; Mature: 22040
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQYSFTKSAGGILVPATPDAESFVKNTRLGTIVTGEFKRVRNAPFHRKFFSLLNLGFEY CCCCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEECHHHHHHCCCHHHHHHHHHHCCHHH WEPSGGAISPFELQFLRGYINRLMAYVGNKGVLHEIADDYLALVAGKRAANLSTVKSFHA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FRRWVTVEAGHYDLFELPDGSTLREPRSISFSAMDELEFNDLYKSTLNVLWTFILSKSFN HHHHEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPFEVENAASQLMSYAA CCCCHHHHHHHHHHHCC >Mature Secondary Structure AQYSFTKSAGGILVPATPDAESFVKNTRLGTIVTGEFKRVRNAPFHRKFFSLLNLGFEY CCCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEECHHHHHHCCCHHHHHHHHHHCCHHH WEPSGGAISPFELQFLRGYINRLMAYVGNKGVLHEIADDYLALVAGKRAANLSTVKSFHA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FRRWVTVEAGHYDLFELPDGSTLREPRSISFSAMDELEFNDLYKSTLNVLWTFILSKSFN HHHHEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPFEVENAASQLMSYAA CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA