| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949395
Identifier: 153949395
GI number: 153949395
Start: 2549765
End: 2550505
Strand: Reverse
Name: 153949395
Synonym: YpsIP31758_2241
Alternate gene names: NA
Gene position: 2550505-2549765 (Counterclockwise)
Preceding gene: 153948966
Following gene: 153948080
Centisome position: 54.0
GC content: 31.58
Gene sequence:
>741_bases ATGATTTATAGCAAGCAATCTGCTGATGCTGTACTAGAAAAATATTTTGATGCATTCATAAAAAACGCATCAACCGTGAT ATTTGATACTGTTGAAAATTTAGAATTAGGTGCTGGGCGGGCATTTATGACAGTATCGCCCGAAATTATACCGGAACTAA CAATGTATCCTCAGTATAATGAAATCATCAAAAAATACTTATCTGCAAACAGAGAACTCATTCTTGTAGAAAATAAAAGA ATGGTCATGGCAATACTTACGATAGTTAATAATACAGATACACTCTCAAAACTTATTAAAATAACTATAGATGTAGCGTT TACGCAAATACCACAGGAATCACAAGAAAAAATAATTGCAGCATTTCCTGACTTTGTGATGTCGTATGGATCTATGCAGA TAGCAAAACAAGCAACAAAAATGGCGACAATGATAGCCTTAACAGAAGTGATATCATCTATTATTGTGAATAAAATATCT TTAGATCCTGATGTGTTAAGAAAAACAAAAACTATAACCAGCGCCAGTCTTATAGCTATCCAAATTTATGCTATTGTAGA AAAAGCTTCAAGGTCAGCTAGGAAGTTGAGGCGTGAAAATAGTATTGTCTATAATAAACTATATCAGGAAAAAATAGAAA TGCTTTACTTTCTAATAGAAAAAAAGGTGGGTGTTTTAATGGATTCGATAAAAAGAAAATCAACTGATGAAATAATTCAA GCGCTAAAGTTTATTTTATGA
Upstream 100 bases:
>100_bases GGAAGGATCACCGACGAAGGTATTTAAACAATATGTTGATTTTTTTTTGCTTATTAATACATAATACTGAATTATCTCAT TAGAAAAGGGAATTCATTAA
Downstream 100 bases:
>100_bases CAGAGGTTTTTTTATGAAACTATTATATCGCGTATTTATAGATTTATTGTTTGTTGCTTTAGCTATGCTGTTTTTCGCGT TCTTCATATATATATCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLELGAGRAFMTVSPEIIPELTMYPQYNEIIKKYLSANRELILVENKR MVMAILTIVNNTDTLSKLIKITIDVAFTQIPQESQEKIIAAFPDFVMSYGSMQIAKQATKMATMIALTEVISSIIVNKIS LDPDVLRKTKTITSASLIAIQIYAIVEKASRSARKLRRENSIVYNKLYQEKIEMLYFLIEKKVGVLMDSIKRKSTDEIIQ ALKFIL
Sequences:
>Translated_246_residues MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLELGAGRAFMTVSPEIIPELTMYPQYNEIIKKYLSANRELILVENKR MVMAILTIVNNTDTLSKLIKITIDVAFTQIPQESQEKIIAAFPDFVMSYGSMQIAKQATKMATMIALTEVISSIIVNKIS LDPDVLRKTKTITSASLIAIQIYAIVEKASRSARKLRRENSIVYNKLYQEKIEMLYFLIEKKVGVLMDSIKRKSTDEIIQ ALKFIL >Mature_246_residues MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLELGAGRAFMTVSPEIIPELTMYPQYNEIIKKYLSANRELILVENKR MVMAILTIVNNTDTLSKLIKITIDVAFTQIPQESQEKIIAAFPDFVMSYGSMQIAKQATKMATMIALTEVISSIIVNKIS LDPDVLRKTKTITSASLIAIQIYAIVEKASRSARKLRRENSIVYNKLYQEKIEMLYFLIEKKVGVLMDSIKRKSTDEIIQ ALKFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27925; Mature: 27925
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLELGAGRAFMTVSPEIIPELTMYPQYN CCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCEEEEECHHHHHCCCCCCCHH EIIKKYLSANRELILVENKRMVMAILTIVNNTDTLSKLIKITIDVAFTQIPQESQEKIIA HHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AFPDFVMSYGSMQIAKQATKMATMIALTEVISSIIVNKISLDPDVLRKTKTITSASLIAI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QIYAIVEKASRSARKLRRENSIVYNKLYQEKIEMLYFLIEKKVGVLMDSIKRKSTDEIIQ HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALKFIL HHHHHC >Mature Secondary Structure MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLELGAGRAFMTVSPEIIPELTMYPQYN CCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCEEEEECHHHHHCCCCCCCHH EIIKKYLSANRELILVENKRMVMAILTIVNNTDTLSKLIKITIDVAFTQIPQESQEKIIA HHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AFPDFVMSYGSMQIAKQATKMATMIALTEVISSIIVNKISLDPDVLRKTKTITSASLIAI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QIYAIVEKASRSARKLRRENSIVYNKLYQEKIEMLYFLIEKKVGVLMDSIKRKSTDEIIQ HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALKFIL HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA