| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948017
Identifier: 153948017
GI number: 153948017
Start: 967310
End: 967942
Strand: Direct
Name: 153948017
Synonym: YpsIP31758_0806
Alternate gene names: NA
Gene position: 967310-967942 (Clockwise)
Preceding gene: 153950380
Following gene: 153948461
Centisome position: 20.48
GC content: 46.6
Gene sequence:
>633_bases ATGAATGAAGAATACAGAAACCACCGTACCGCGTGGACTGTGGGCGAATTGACGTTTGTGGAAGCACACTATGGGAAGAT ACCTGTCGCTGAGATAGCGGCTCACTTGGGCCGTACAGTGACAGCAATAAGATTGGCAGCCAAAGAGTTAGGGCTTTGTA AGGTGCAGGCGGGCCCTTGGACTGAAGAGGAAAAAGCAGTTCTGCGCACTCATTATGCTGATGGGGCAGGTATTGCTTAT GTACAAACGCAACTGCCTGGTCGGGCCAAACACTCGATTACGGAAAAGGCGCGGGATATGGGAATAACCAGTGCGCGTAA CTGGCACCCTGATGAAGTCCTTATTTTGACGCAGTTTTACCCTAAGATGGGCACCAAAGTGGTTCAAAAACTGCACCGCA GAAGTGTTGAGTCGATCAAAATCAAGGCAAGCCAACTGGGTTTGAAATATACGAAACTCAAAGTGCGTGAGACACCTGTG CAGCGCTGGACTGATGACGAGTGGCACTTGTTGGAGAAGAACCTTCATTTGTTCCCCTCGGAGATGACGCTATTATTTCC AAATCGTACAAAGTTAGCGATTGAAAAAGCAAAAGAAAGATTAAGAAAACATAACAATATGATTTCTAAGTAA
Upstream 100 bases:
>100_bases CCGTAGGTGTGATGCGCGACTGACCATACCATGCAGTCAAAAAAGGATTTATTGCCTGTGCCGGGAAAGGCTGAATAGGG CAATGTGTAAGGAAACTGCG
Downstream 100 bases:
>100_bases GCTTCTCTTACCAACATTGCCTTACCGTAATGAGTATTTTTCTAATGACTTCACAGGACCCGTATGGCTGAGCTTATCCC TACACTAAATAGTTGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNEEYRNHRTAWTVGELTFVEAHYGKIPVAEIAAHLGRTVTAIRLAAKELGLCKVQAGPWTEEEKAVLRTHYADGAGIAY VQTQLPGRAKHSITEKARDMGITSARNWHPDEVLILTQFYPKMGTKVVQKLHRRSVESIKIKASQLGLKYTKLKVRETPV QRWTDDEWHLLEKNLHLFPSEMTLLFPNRTKLAIEKAKERLRKHNNMISK
Sequences:
>Translated_210_residues MNEEYRNHRTAWTVGELTFVEAHYGKIPVAEIAAHLGRTVTAIRLAAKELGLCKVQAGPWTEEEKAVLRTHYADGAGIAY VQTQLPGRAKHSITEKARDMGITSARNWHPDEVLILTQFYPKMGTKVVQKLHRRSVESIKIKASQLGLKYTKLKVRETPV QRWTDDEWHLLEKNLHLFPSEMTLLFPNRTKLAIEKAKERLRKHNNMISK >Mature_210_residues MNEEYRNHRTAWTVGELTFVEAHYGKIPVAEIAAHLGRTVTAIRLAAKELGLCKVQAGPWTEEEKAVLRTHYADGAGIAY VQTQLPGRAKHSITEKARDMGITSARNWHPDEVLILTQFYPKMGTKVVQKLHRRSVESIKIKASQLGLKYTKLKVRETPV QRWTDDEWHLLEKNLHLFPSEMTLLFPNRTKLAIEKAKERLRKHNNMISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24142; Mature: 24142
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEEYRNHRTAWTVGELTFVEAHYGKIPVAEIAAHLGRTVTAIRLAAKELGLCKVQAGPW CCCCHHCCCCEEEECCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCC TEEEKAVLRTHYADGAGIAYVQTQLPGRAKHSITEKARDMGITSARNWHPDEVLILTQFY CCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHH PKMGTKVVQKLHRRSVESIKIKASQLGLKYTKLKVRETPVQRWTDDEWHLLEKNLHLFPS HHHHHHHHHHHHHCCHHHEEEEHHHCCCEEEEEEEECCCHHHCCCCHHHHHHCCCCCCCC EMTLLFPNRTKLAIEKAKERLRKHNNMISK CEEEECCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEEYRNHRTAWTVGELTFVEAHYGKIPVAEIAAHLGRTVTAIRLAAKELGLCKVQAGPW CCCCHHCCCCEEEECCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCC TEEEKAVLRTHYADGAGIAYVQTQLPGRAKHSITEKARDMGITSARNWHPDEVLILTQFY CCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHH PKMGTKVVQKLHRRSVESIKIKASQLGLKYTKLKVRETPVQRWTDDEWHLLEKNLHLFPS HHHHHHHHHHHHHCCHHHEEEEHHHCCCEEEEEEEECCCHHHCCCCHHHHHHCCCCCCCC EMTLLFPNRTKLAIEKAKERLRKHNNMISK CEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA