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The map label for this gene is wbyH

Identifier: 153948004

GI number: 153948004

Start: 3431173

End: 3432456

Strand: Reverse

Name: wbyH

Synonym: YpsIP31758_3047

Alternate gene names: NA

Gene position: 3432456-3431173 (Counterclockwise)

Preceding gene: 153948451

Following gene: 153950559

Centisome position: 72.67

GC content: 35.05

Gene sequence:

>1284_bases
ATGGATATGAAATTTTGTAAAAACCGTTATATCAATACAGTCATTTTAGGGGCAGGCGTTGCGGGGTTAGGTGCAGCTCT
GAAAGCCCGTGAAGTAAATATTGAATATGAAATTTTTGAAGCAAAAACATCTGCGGGTGGTTTGTTAGACAATTTTGTCA
TTGATGGATATCGTTTTGATAATGCAGTTCATCTTAGTTTTGCTACAGAAGAGAAGGTAAGAGATGTTTTTGATAGAACA
CCTTATTTCTCTCATTCTCCAGATGCTGTAAATTTTGAAACAGATAAGTGGTTAAAACATCCAGTGCAGAATAACCTTTA
TCCTCTTCCTGCAATTGAGAAAGTCACACTCATTGAGTCCCTGATTCATCGTCCTGAGAGTGAGCTTGCTGATAACTACG
AATCTTGGTTAATTCACCAGTATGGTAATGAAATTGCCAAGCGATACCCTATGCGTTATACACGGAAATATTGGCAGTGT
AATGCGAATGAACTATCGGTTAGTTGGATTGGTAATCGTCTACGGCGAGCTAAGCTGTCAGAAATATTATATGGCGCATT
CACTGATGATACTCCTAATGATTATTATGCAAAAGAAATGCGTTATCCCAAAAAAGGAGGGTTTAAATCTTTTATTCAAC
CTCTTATAGATGAGAGCATTATTAACTATAATTATGAGGTTACTGAGATTGACTTATCTGGGAAGACTATCAAATTCTCT
AATGGAGTCATAATCAGTTATGAAAATTTAATAAATACATTACCACTACCACTGTTTATTGAGTTTTGTGGAGCTAATGT
ACCTACAAGCGTCAAAAAATCCGCAAGTAAGTTAGAGGCAACATCATTAGATCTAATATCTGTTGGCTTCAACAAATCTA
TCATTAAAGATTTATGGTTTTATATCTATGATGAAGATATTTATGCAAGTCGCGCATATTCTCCCTCTGTTAAATCATCG
GATAATGTTCCTGACGGTTGCAGTTCGTTACAGTTTGAAATTTATAATCCCGGGAGAGATAGCCAGTATACTGTACAGGA
ATTGAAAGACAATGTTATTTATGCAATGAAAAAAATGGGAGTTGCAAATAATGAAGATATTGTTTTCTTGCATCACAAGC
GTCTCCCATGGGGTAATGTTGTATTCAAAAAAGATATGGAAAAGTATAGGGATATTGTTCGAGAATACATTTTTGACAAT
CAAGTGAAAAGTGTAGGACGTTTTGGTGAATGGGATTATTTATGGAGTAATCAGAGTTTTCTTAGTGGATATAGTTCAAT
TTAA

Upstream 100 bases:

>100_bases
TAGCTGTGCATCATTGGCGAGAATACAGGAACTCGGTTGGTTGTGCCAATATTCATTAAATAGTGCAATTAAAGATACAC
TAAACAGAATGCGGGTCTGA

Downstream 100 bases:

>100_bases
TAATTTAATAATTTAATAATTTAATAATTTAATAATTTAATAATTTAATAATTAAAAGTTAAAAGTTAAAAGTTAAAAGT
TAAAAGTTAAAAGTTAAAAG

Product: O-antigen synthesis protein WbyH

Products: NA

Alternate protein names: UDP-Galactopyranose Mutase; Amine Oxidase Flavin-Containing; FAD Dependent Oxidoreductase; Amine Oxidase Family Protein; Teichuronic Acid Biosynthesis Glycosyltransferase TuaH; Amine Oxidase Flavin-Containing Superfamily; Protoporphyrinogen Oxidase-Like Protein; Flavin-Containing Amine Oxidoreductase Family Protein; Protoporphyrinogen Oxidase

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MDMKFCKNRYINTVILGAGVAGLGAALKAREVNIEYEIFEAKTSAGGLLDNFVIDGYRFDNAVHLSFATEEKVRDVFDRT
PYFSHSPDAVNFETDKWLKHPVQNNLYPLPAIEKVTLIESLIHRPESELADNYESWLIHQYGNEIAKRYPMRYTRKYWQC
NANELSVSWIGNRLRRAKLSEILYGAFTDDTPNDYYAKEMRYPKKGGFKSFIQPLIDESIINYNYEVTEIDLSGKTIKFS
NGVIISYENLINTLPLPLFIEFCGANVPTSVKKSASKLEATSLDLISVGFNKSIIKDLWFYIYDEDIYASRAYSPSVKSS
DNVPDGCSSLQFEIYNPGRDSQYTVQELKDNVIYAMKKMGVANNEDIVFLHHKRLPWGNVVFKKDMEKYRDIVREYIFDN
QVKSVGRFGEWDYLWSNQSFLSGYSSI

Sequences:

>Translated_427_residues
MDMKFCKNRYINTVILGAGVAGLGAALKAREVNIEYEIFEAKTSAGGLLDNFVIDGYRFDNAVHLSFATEEKVRDVFDRT
PYFSHSPDAVNFETDKWLKHPVQNNLYPLPAIEKVTLIESLIHRPESELADNYESWLIHQYGNEIAKRYPMRYTRKYWQC
NANELSVSWIGNRLRRAKLSEILYGAFTDDTPNDYYAKEMRYPKKGGFKSFIQPLIDESIINYNYEVTEIDLSGKTIKFS
NGVIISYENLINTLPLPLFIEFCGANVPTSVKKSASKLEATSLDLISVGFNKSIIKDLWFYIYDEDIYASRAYSPSVKSS
DNVPDGCSSLQFEIYNPGRDSQYTVQELKDNVIYAMKKMGVANNEDIVFLHHKRLPWGNVVFKKDMEKYRDIVREYIFDN
QVKSVGRFGEWDYLWSNQSFLSGYSSI
>Mature_427_residues
MDMKFCKNRYINTVILGAGVAGLGAALKAREVNIEYEIFEAKTSAGGLLDNFVIDGYRFDNAVHLSFATEEKVRDVFDRT
PYFSHSPDAVNFETDKWLKHPVQNNLYPLPAIEKVTLIESLIHRPESELADNYESWLIHQYGNEIAKRYPMRYTRKYWQC
NANELSVSWIGNRLRRAKLSEILYGAFTDDTPNDYYAKEMRYPKKGGFKSFIQPLIDESIINYNYEVTEIDLSGKTIKFS
NGVIISYENLINTLPLPLFIEFCGANVPTSVKKSASKLEATSLDLISVGFNKSIIKDLWFYIYDEDIYASRAYSPSVKSS
DNVPDGCSSLQFEIYNPGRDSQYTVQELKDNVIYAMKKMGVANNEDIVFLHHKRLPWGNVVFKKDMEKYRDIVREYIFDN
QVKSVGRFGEWDYLWSNQSFLSGYSSI

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990307, Length=478, Percent_Identity=23.4309623430962, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49239; Mature: 49239

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKFCKNRYINTVILGAGVAGLGAALKAREVNIEYEIFEAKTSAGGLLDNFVIDGYRFD
CCCHHHHHCCCCEEEEECCHHHHHHHHEEEEECEEEEEEECCCCCCCCHHHHEECCEEEC
NAVHLSFATEEKVRDVFDRTPYFSHSPDAVNFETDKWLKHPVQNNLYPLPAIEKVTLIES
CEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHCCCCCCCCHHHHHHHHH
LIHRPESELADNYESWLIHQYGNEIAKRYPMRYTRKYWQCNANELSVSWIGNRLRRAKLS
HHHCCHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
EILYGAFTDDTPNDYYAKEMRYPKKGGFKSFIQPLIDESIINYNYEVTEIDLSGKTIKFS
HHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEC
NGVIISYENLINTLPLPLFIEFCGANVPTSVKKSASKLEATSLDLISVGFNKSIIKDLWF
CCEEEEEHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
YIYDEDIYASRAYSPSVKSSDNVPDGCSSLQFEIYNPGRDSQYTVQELKDNVIYAMKKMG
EEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
VANNEDIVFLHHKRLPWGNVVFKKDMEKYRDIVREYIFDNQVKSVGRFGEWDYLWSNQSF
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH
LSGYSSI
HHHCCCC
>Mature Secondary Structure
MDMKFCKNRYINTVILGAGVAGLGAALKAREVNIEYEIFEAKTSAGGLLDNFVIDGYRFD
CCCHHHHHCCCCEEEEECCHHHHHHHHEEEEECEEEEEEECCCCCCCCHHHHEECCEEEC
NAVHLSFATEEKVRDVFDRTPYFSHSPDAVNFETDKWLKHPVQNNLYPLPAIEKVTLIES
CEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHCCCCCCCCHHHHHHHHH
LIHRPESELADNYESWLIHQYGNEIAKRYPMRYTRKYWQCNANELSVSWIGNRLRRAKLS
HHHCCHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
EILYGAFTDDTPNDYYAKEMRYPKKGGFKSFIQPLIDESIINYNYEVTEIDLSGKTIKFS
HHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEC
NGVIISYENLINTLPLPLFIEFCGANVPTSVKKSASKLEATSLDLISVGFNKSIIKDLWF
CCEEEEEHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
YIYDEDIYASRAYSPSVKSSDNVPDGCSSLQFEIYNPGRDSQYTVQELKDNVIYAMKKMG
EEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
VANNEDIVFLHHKRLPWGNVVFKKDMEKYRDIVREYIFDNQVKSVGRFGEWDYLWSNQSF
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH
LSGYSSI
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA