| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947964
Identifier: 153947964
GI number: 153947964
Start: 1085244
End: 1086023
Strand: Direct
Name: 153947964
Synonym: YpsIP31758_0902
Alternate gene names: NA
Gene position: 1085244-1086023 (Clockwise)
Preceding gene: 153949554
Following gene: 153950282
Centisome position: 22.98
GC content: 35.13
Gene sequence:
>780_bases ATGAAAAAGGTAAATTTACTGGTCTGGATAGGTTTATCACTAAACTTAGTGCTTGTTTTGGCCAGTTGGTTTTTCACTGT AGACTATCAGGAACTCTATGGTGAGTTAGGCTATAGAGATCGGATGTTGCTTGATGCTATCGCCGTATTGAGATACTACT TTGCTGTTAGTCTTGTATTGCAAATCCTTAGCGTGATTTTTCTAGATAAAGCCAATAAACTTTCATTTGGATTGGCCATT ATCTCTTGCCTGGGTATGTTACCCCTCAGTATTGTTTTCCTTATTGGTTATCTCTTTACCTATAACGATTACGTTTACCG TGGTTTAAAGACGTTTTCATTAAATGAAACGGGTAAGCTTGATACATATCTAAATTTTGCCACTGTTCGTTATTTTATGC TAGGTGCGTTTGCAACTGTAGCGGGTGTTTTTATGTTTTTCACTGATATGCCAATGAGTATGTTAATTATTGTCGTCGGT GTGTTGAATATGATAAATGGTATTCGGTTGGGGCCTCGCCCTGTGATTGCCTTAATGGGGGATAATCTGGTATTTACACC CGCGTTGATGTCGAATACTTATATTATCTCAATTGAGCACGTTGACCTGGTAGAAAGCAAAAAAGGTAAATTCAAGATTA AATTAAATTTAGAGGGATTAGAGAAAAAAATAACTTTCCAGAAAAATATAATGGAAAATGATAAAGATTCTAGTGCTCTT GAAAAAATACTTGCCAAAATTGAAAAAAATAACGGTGAAAAACAGCATATTTTCTTGTAA
Upstream 100 bases:
>100_bases TTACAATTAACACATATTAAAATAAGATGTGCTGGATAAATGGTGTAAATATGTACAATAAATAAAATAATATTATGTTT ATGAATTATAAGGGTAATTT
Downstream 100 bases:
>100_bases GAGATTGAAACGTTATTATTCGGTCAAGAGCGATGTCAATTTTGCATCAAATTATGGCGATACGGCATTGCTCTTACCCG TCTTAGATACGAAGGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVLQILSVIFLDKANKLSFGLAI ISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKLDTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVG VLNMINGIRLGPRPVIALMGDNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL EKILAKIEKNNGEKQHIFL
Sequences:
>Translated_259_residues MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVLQILSVIFLDKANKLSFGLAI ISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKLDTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVG VLNMINGIRLGPRPVIALMGDNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL EKILAKIEKNNGEKQHIFL >Mature_259_residues MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVLQILSVIFLDKANKLSFGLAI ISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKLDTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVG VLNMINGIRLGPRPVIALMGDNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL EKILAKIEKNNGEKQHIFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29382; Mature: 29382
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVL CCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH QILSVIFLDKANKLSFGLAIISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCH DTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVGVLNMINGIRLGPRPVIALMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC DNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL CCEEEEHHHHCCEEEEEEECEEHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH EKILAKIEKNNGEKQHIFL HHHHHHHHHCCCCCEECCC >Mature Secondary Structure MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVL CCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH QILSVIFLDKANKLSFGLAIISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCH DTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVGVLNMINGIRLGPRPVIALMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC DNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL CCEEEEHHHHCCEEEEEEECEEHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH EKILAKIEKNNGEKQHIFL HHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA