Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153949554

Identifier: 153949554

GI number: 153949554

Start: 1083871

End: 1084638

Strand: Direct

Name: 153949554

Synonym: YpsIP31758_0901

Alternate gene names: NA

Gene position: 1083871-1084638 (Clockwise)

Preceding gene: 153948948

Following gene: 153947964

Centisome position: 22.95

GC content: 50.91

Gene sequence:

>768_bases
ATGGGCAGAACGGCTCAACTATTACTGGTAAGCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGA
CAAACTGCAGTTGAGCCATAAGGTGTATGCCCATGATTATCAGGCGTTTTGGTTGTGGTCAGGTGTGAACCCACAGCCCG
CTTTACAGCAGGCGAATCAGGTTTATCTGCATCAGGGGGAAGTGGTTATTCGCCAACGAGCTGCCTGGTTTCAGAAAATG
GGGCTACCCAGCTCTAGGCTGACACTGCCTGCGATGTGGGTCACGGTGCGCATCACCACGTTGGATGTACCAGATGATAT
TTTGGCGATTCTGATTGATTTACCCCGGCGGTGGGCCGCCGCTGGAAATCAGGTCATCGGGCTACAGATTGATTTTGATG
CAGGCACCTATCGTCTTGATGATTACGCTGGGTTCCTGCGCCGGGTGCGCACTAAGCTGGATCCAAATTTTGCACTTGGT
GTAACCGGCTTATTGGACTGGGCAAAAACCGGTAGCATCCAGCAGCTCAATGCGTTGCCGATTGATGAACTGGTGATACA
AACCTATCAGGGGCGATCAACCGTTAATCAGTACTCACGTTACTTACCCGCCTTGCTGCAATTACGTCTTCCCTTCAAGA
TTGGTTTGGTTCAACACGGGGAGTGGGATCCGCAATGGGAACAGTATCTGGCTGCTTCCCCTTTTTATCGGGGAGAAGTC
GTCTTTTTGCTTAATCATCTTCGCTCTGAACCTGCTAACGGTAAATAA

Upstream 100 bases:

>100_bases
ATGCCCCATCGGGCTATAATCAATGTGGGGGTGAGGATGTCGATATTGCAACACGTAAGCGTTGGTTTAGCTCATTGAAA
ACTCAGTATAAAGGTAGCCG

Downstream 100 bases:

>100_bases
TTTTGAACATTTCCGTCGTCACCAATGTGGCCGTGCGTTTCTATAAGTGCCAAGTTGCCAAACCTTGTTGCCCAAAGGGA
AATAGTTGAGAGAGTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MGRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKM
GLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALG
VTGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV
VFLLNHLRSEPANGK

Sequences:

>Translated_255_residues
MGRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKM
GLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALG
VTGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV
VFLLNHLRSEPANGK
>Mature_254_residues
GRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKMG
LPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGV
TGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVV
FLLNHLRSEPANGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28899; Mature: 28768

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQ
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCHHHHHCCE
VYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAA
EEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCCHHHHH
AGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNALP
CCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCC
IDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHH
VFLLNHLRSEPANGK
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
GRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCHHHHHCCE
VYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAA
EEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCCHHHHH
AGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNALP
CCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCC
IDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHH
VFLLNHLRSEPANGK
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA