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The map label for this gene is yidQ [H]

Identifier: 153947928

GI number: 153947928

Start: 4679221

End: 4679559

Strand: Direct

Name: yidQ [H]

Synonym: YpsIP31758_4144

Alternate gene names: 153947928

Gene position: 4679221-4679559 (Clockwise)

Preceding gene: 153950052

Following gene: 153949828

Centisome position: 99.07

GC content: 50.15

Gene sequence:

>339_bases
ATGAGAAATATCGTTATCCCTTTTGCTACTGGCTGTTCGCTGCTGCTGACCAGCGGTTGTTCCAGTATTTTGACTCACAC
CAGCAGTAGCCAAGGCTATTACTCTGGCACCGAAGCCAATATCGCCATGCTCAAAGATGACGATACCGGCTGGGCACTAC
GCCCCTTACTGGCAGTAGACCTGCCTTTCTCCGCCGTGATGGATACCCTATTTCTGCCCTACGATTATCTGCGTTCAGAC
AGTGAAGATAAAGCGGCCAGTTCACCACGTGAACGTGTCCGGCAATCCGAGATGCAAAACCAGCAAACTAATCAGACAGG
TGATACGCCAAAACAATAG

Upstream 100 bases:

>100_bases
TGACTATAGGAAGTGTCTGTAAGAGAGTGTAAAAATGAAAGACAAAACCTGACACTGACGTCGTGGGTTAATCACTTGGT
GATGAGAGCCGAATAACATA

Downstream 100 bases:

>100_bases
ATCCGCCCAATCCTATCCAGCCAATAGATTTTATCGATGCTAATCAGCATGCACAGTAAAAATTTGTGCCCATCCATCGA
TCTCACGCATAAACGCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRNIVIPFATGCSLLLTSGCSSILTHTSSSQGYYSGTEANIAMLKDDDTGWALRPLLAVDLPFSAVMDTLFLPYDYLRSD
SEDKAASSPRERVRQSEMQNQQTNQTGDTPKQ

Sequences:

>Translated_112_residues
MRNIVIPFATGCSLLLTSGCSSILTHTSSSQGYYSGTEANIAMLKDDDTGWALRPLLAVDLPFSAVMDTLFLPYDYLRSD
SEDKAASSPRERVRQSEMQNQQTNQTGDTPKQ
>Mature_112_residues
MRNIVIPFATGCSLLLTSGCSSILTHTSSSQGYYSGTEANIAMLKDDDTGWALRPLLAVDLPFSAVMDTLFLPYDYLRSD
SEDKAASSPRERVRQSEMQNQQTNQTGDTPKQ

Specific function: Unknown

COG id: COG5645

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceK [H]

Homologues:

Organism=Escherichia coli, GI87082317, Length=104, Percent_Identity=43.2692307692308, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010780 [H]

Pfam domain/function: PF07119 DUF1375 [H]

EC number: NA

Molecular weight: Translated: 12325; Mature: 12325

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIVIPFATGCSLLLTSGCSSILTHTSSSQGYYSGTEANIAMLKDDDTGWALRPLLAVD
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHCC
LPFSAVMDTLFLPYDYLRSDSEDKAASSPRERVRQSEMQNQQTNQTGDTPKQ
CCHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRNIVIPFATGCSLLLTSGCSSILTHTSSSQGYYSGTEANIAMLKDDDTGWALRPLLAVD
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHCC
LPFSAVMDTLFLPYDYLRSDSEDKAASSPRERVRQSEMQNQQTNQTGDTPKQ
CCHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]