| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947864
Identifier: 153947864
GI number: 153947864
Start: 4278849
End: 4279808
Strand: Direct
Name: 153947864
Synonym: YpsIP31758_3794
Alternate gene names: NA
Gene position: 4278849-4279808 (Clockwise)
Preceding gene: 153947603
Following gene: 153948433
Centisome position: 90.59
GC content: 48.75
Gene sequence:
>960_bases ATGAAATCAACACCTTCTGCGTACGCTTTGGGGGCAACACTTTATATGCCTGCTACGCGTACCGATATTGCCGATATTAT TATTCATAATAAAATTTCCGGCCTGCGCTCACTGGTAATCTGCCTGGAAGATGCCGTGAGCGAAGATGATGTGCCACTGG CTATCTCTCAACTCAGCACCTTATTAGGTACGCTAGCCGTAGAGAAAAAACGCGATGGATCTGCCCATTGGCCGCTGATC TTTGTTCGTCCACGTCATGAAGCGATGGGGCTAGCATTAATCACCCGTTTTAATCTGAGCGCTATCAATGGCTTTGTGTT GCCAAAGTTTACCCAAGCATCCATTACTACCTGGTGGGAGATCATGAAAGAGACTCATCTGTGCATGATGCCAACGCTGG AAACTGAAGATGTCTTTGATGTAGCGAAGATGAGTACTCTCGCCAGGGAGCTGGAAAATCACCCCTCTCGTCAACGCATT GTTGCGCTGCGCATTGGTGGTAATGATCTGATGAGTGTTATTTCGATGCGGCGCTCGCGTAAGTTGACGCTGTACGATGG CCCGATGGGCTACGTGATCAAAATGCTGGTTTCGGTATTCTGTCCAAAGAATTTTGCGTTAACCGCACCGGTCTGTGAGC AAATAGATAATCCGCAGTTGCTGGAAACAGAACTGGCGCTGGATATCGCTCATGGTCTGGTGGGGAAAACCGCCATTCAT CCAAGCCAGATCGAAGTCATTCAACGCGCCTTAATGGTCGACACTCATGATCACGCTGATGCATTGCGCATCCTCAATTC AACACAGGCAGTTTTCAAGTCTCAGGGGGCGATGTGTGAACCATCTACTCATAAGCGCTGGGCGGCGGCAATCCTTGAGC GTGCACAATATTACGGAATAATGCCTGATTTTACTGCGATGGCGGTTCGTGATGCGCCAAGAAAACATCAGAGTGGATAA
Upstream 100 bases:
>100_bases TGCTGGTCTATTTAGCCAAACAGAAGAAAATCGCAATAAAAGAAGTGGGGAATGAACTGGGCCAATACCGTGCTATCACC ATAATTAAAAAGGTCATCTG
Downstream 100 bases:
>100_bases GACATGCCATGTGCAAAGGGGCATAAGCGCGAATATAGCCAATTTGGCAAAGCTGTTCGCTCATATATAGAACGCTTTTT GAGTCTCTTTTAGCCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKSTPSAYALGATLYMPATRTDIADIIIHNKISGLRSLVICLEDAVSEDDVPLAISQLSTLLGTLAVEKKRDGSAHWPLI FVRPRHEAMGLALITRFNLSAINGFVLPKFTQASITTWWEIMKETHLCMMPTLETEDVFDVAKMSTLARELENHPSRQRI VALRIGGNDLMSVISMRRSRKLTLYDGPMGYVIKMLVSVFCPKNFALTAPVCEQIDNPQLLETELALDIAHGLVGKTAIH PSQIEVIQRALMVDTHDHADALRILNSTQAVFKSQGAMCEPSTHKRWAAAILERAQYYGIMPDFTAMAVRDAPRKHQSG
Sequences:
>Translated_319_residues MKSTPSAYALGATLYMPATRTDIADIIIHNKISGLRSLVICLEDAVSEDDVPLAISQLSTLLGTLAVEKKRDGSAHWPLI FVRPRHEAMGLALITRFNLSAINGFVLPKFTQASITTWWEIMKETHLCMMPTLETEDVFDVAKMSTLARELENHPSRQRI VALRIGGNDLMSVISMRRSRKLTLYDGPMGYVIKMLVSVFCPKNFALTAPVCEQIDNPQLLETELALDIAHGLVGKTAIH PSQIEVIQRALMVDTHDHADALRILNSTQAVFKSQGAMCEPSTHKRWAAAILERAQYYGIMPDFTAMAVRDAPRKHQSG >Mature_319_residues MKSTPSAYALGATLYMPATRTDIADIIIHNKISGLRSLVICLEDAVSEDDVPLAISQLSTLLGTLAVEKKRDGSAHWPLI FVRPRHEAMGLALITRFNLSAINGFVLPKFTQASITTWWEIMKETHLCMMPTLETEDVFDVAKMSTLARELENHPSRQRI VALRIGGNDLMSVISMRRSRKLTLYDGPMGYVIKMLVSVFCPKNFALTAPVCEQIDNPQLLETELALDIAHGLVGKTAIH PSQIEVIQRALMVDTHDHADALRILNSTQAVFKSQGAMCEPSTHKRWAAAILERAQYYGIMPDFTAMAVRDAPRKHQSG
Specific function: Unknown
COG id: COG2301
COG function: function code G; Citrate lyase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35421; Mature: 35421
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTPSAYALGATLYMPATRTDIADIIIHNKISGLRSLVICLEDAVSEDDVPLAISQLST CCCCCCCEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LLGTLAVEKKRDGSAHWPLIFVRPRHEAMGLALITRFNLSAINGFVLPKFTQASITTWWE HHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHCCEECCCCCHHHHHHHHH IMKETHLCMMPTLETEDVFDVAKMSTLARELENHPSRQRIVALRIGGNDLMSVISMRRSR HHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCC KLTLYDGPMGYVIKMLVSVFCPKNFALTAPVCEQIDNPQLLETELALDIAHGLVGKTAIH CEEEEECCHHHHHHHHHHHHCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC PSQIEVIQRALMVDTHDHADALRILNSTQAVFKSQGAMCEPSTHKRWAAAILERAQYYGI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC MPDFTAMAVRDAPRKHQSG CCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MKSTPSAYALGATLYMPATRTDIADIIIHNKISGLRSLVICLEDAVSEDDVPLAISQLST CCCCCCCEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LLGTLAVEKKRDGSAHWPLIFVRPRHEAMGLALITRFNLSAINGFVLPKFTQASITTWWE HHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHCCEECCCCCHHHHHHHHH IMKETHLCMMPTLETEDVFDVAKMSTLARELENHPSRQRIVALRIGGNDLMSVISMRRSR HHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCC KLTLYDGPMGYVIKMLVSVFCPKNFALTAPVCEQIDNPQLLETELALDIAHGLVGKTAIH CEEEEECCHHHHHHHHHHHHCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC PSQIEVIQRALMVDTHDHADALRILNSTQAVFKSQGAMCEPSTHKRWAAAILERAQYYGI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC MPDFTAMAVRDAPRKHQSG CCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA