| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947603
Identifier: 153947603
GI number: 153947603
Start: 4277770
End: 4278849
Strand: Direct
Name: 153947603
Synonym: YpsIP31758_3793
Alternate gene names: NA
Gene position: 4277770-4278849 (Clockwise)
Preceding gene: 153949800
Following gene: 153947864
Centisome position: 90.57
GC content: 52.41
Gene sequence:
>1080_bases ATGCATGACATTACGCCTTTTTCTGGCTCCTATTTGCCAGATGACATTCAATTTCTGCTCAAACCAATACAAATTGAAAT GACACCGGTCGAGGTTAAAGAGAAACTGATCCAGTCAGGGGCCCGCCATTATTCTGACATGCTCAGTCAGGAGCCAGCGC CGACCGAGCATCACCTCACCTTGTTTGCACGAGCACTCGATCAAGGGGCCACACGCATGGCGCGTGAAGTGGTGATGCTG GCGAAAGCCCTAATCAACCGTTTCGGTGATACCCCAATCGTGCTCGCCAGCTTGGTACGCGCGGGCGTACCACTTGGTGT GATGCTCCATCACACTCTCCGCGCATTGGGAAAAACCTCTTTTCACTACGGTATCAGTATCATCCGTGACCGGGGGATTG ATGAGGTCGCCTTGTCATATATTGAGCAAAAACACGGCACCGAAGGGCTGGTTTTCGTCGACGGTTGGACAGGTAAAGGG GCGATCACCGGTGAACTGACGCGCTCCCTACAGGGGCGTCCGGGCTACCCCGAGCTGCCTCGTCTGGTGGTGTTGGCCGA TCCCTGTGGCTGTTCTTGGTTATCTGCAACCGATGATGATTGGCTTATCCCGTTCGGTATTATGGGCGCACCAGTCTCGG GGCTGGTCTCCCGTTCCCTCTGGTCGGAAAAAGGGCTACACGGTTGTGTTCACTGTGAGCATTTGCAGGAGTTTGAGTGC AGCCAACTGTTGGTGAATACCGTCGCTGACTGTCGCCAACAACTTGATCTGTCCCAGATACCCGCGGCGGAGTGGGATTA TCAGCAAAATGCCGCCCTGCGGATCCAAAGCCATCAAGTGGTGAAAAAGATGGCGGAACAGTTTGAGATTAATAGCGTAA ATCGCATCAAACCGGGAATTGCTGAAGCGACCCGAGCCGTTCTTCGCCGTGTACCTGACCATGTTCTGGTTCGTCACATT GACGATCCTGACGTGTCATTGCTGGTCTATTTAGCCAAACAGAAGAAAATCGCAATAAAAGAAGTGGGGAATGAACTGGG CCAATACCGTGCTATCACCATAATTAAAAAGGTCATCTGA
Upstream 100 bases:
>100_bases TGGTTCGGTATGCCCGCGAAAAGTCAGTTCTCGCAGGCCCTGACATCGCATTTATTTGATAACACGACATTTAATAAAAA TAATGTTAATGGAGATAACG
Downstream 100 bases:
>100_bases TGAAATCAACACCTTCTGCGTACGCTTTGGGGGCAACACTTTATATGCCTGCTACGCGTACCGATATTGCCGATATTATT ATTCATAATAAAATTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MHDITPFSGSYLPDDIQFLLKPIQIEMTPVEVKEKLIQSGARHYSDMLSQEPAPTEHHLTLFARALDQGATRMAREVVML AKALINRFGDTPIVLASLVRAGVPLGVMLHHTLRALGKTSFHYGISIIRDRGIDEVALSYIEQKHGTEGLVFVDGWTGKG AITGELTRSLQGRPGYPELPRLVVLADPCGCSWLSATDDDWLIPFGIMGAPVSGLVSRSLWSEKGLHGCVHCEHLQEFEC SQLLVNTVADCRQQLDLSQIPAAEWDYQQNAALRIQSHQVVKKMAEQFEINSVNRIKPGIAEATRAVLRRVPDHVLVRHI DDPDVSLLVYLAKQKKIAIKEVGNELGQYRAITIIKKVI
Sequences:
>Translated_359_residues MHDITPFSGSYLPDDIQFLLKPIQIEMTPVEVKEKLIQSGARHYSDMLSQEPAPTEHHLTLFARALDQGATRMAREVVML AKALINRFGDTPIVLASLVRAGVPLGVMLHHTLRALGKTSFHYGISIIRDRGIDEVALSYIEQKHGTEGLVFVDGWTGKG AITGELTRSLQGRPGYPELPRLVVLADPCGCSWLSATDDDWLIPFGIMGAPVSGLVSRSLWSEKGLHGCVHCEHLQEFEC SQLLVNTVADCRQQLDLSQIPAAEWDYQQNAALRIQSHQVVKKMAEQFEINSVNRIKPGIAEATRAVLRRVPDHVLVRHI DDPDVSLLVYLAKQKKIAIKEVGNELGQYRAITIIKKVI >Mature_359_residues MHDITPFSGSYLPDDIQFLLKPIQIEMTPVEVKEKLIQSGARHYSDMLSQEPAPTEHHLTLFARALDQGATRMAREVVML AKALINRFGDTPIVLASLVRAGVPLGVMLHHTLRALGKTSFHYGISIIRDRGIDEVALSYIEQKHGTEGLVFVDGWTGKG AITGELTRSLQGRPGYPELPRLVVLADPCGCSWLSATDDDWLIPFGIMGAPVSGLVSRSLWSEKGLHGCVHCEHLQEFEC SQLLVNTVADCRQQLDLSQIPAAEWDYQQNAALRIQSHQVVKKMAEQFEINSVNRIKPGIAEATRAVLRRVPDHVLVRHI DDPDVSLLVYLAKQKKIAIKEVGNELGQYRAITIIKKVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39884; Mature: 39884
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDITPFSGSYLPDDIQFLLKPIQIEMTPVEVKEKLIQSGARHYSDMLSQEPAPTEHHLT CCCCCCCCCCCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LFARALDQGATRMAREVVMLAKALINRFGDTPIVLASLVRAGVPLGVMLHHTLRALGKTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCH FHYGISIIRDRGIDEVALSYIEQKHGTEGLVFVDGWTGKGAITGELTRSLQGRPGYPELP HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC RLVVLADPCGCSWLSATDDDWLIPFGIMGAPVSGLVSRSLWSEKGLHGCVHCEHLQEFEC EEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SQLLVNTVADCRQQLDLSQIPAAEWDYQQNAALRIQSHQVVKKMAEQFEINSVNRIKPGI HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHCCCCH AEATRAVLRRVPDHVLVRHIDDPDVSLLVYLAKQKKIAIKEVGNELGQYRAITIIKKVI HHHHHHHHHHCCHHHHHCCCCCCCHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MHDITPFSGSYLPDDIQFLLKPIQIEMTPVEVKEKLIQSGARHYSDMLSQEPAPTEHHLT CCCCCCCCCCCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LFARALDQGATRMAREVVMLAKALINRFGDTPIVLASLVRAGVPLGVMLHHTLRALGKTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCH FHYGISIIRDRGIDEVALSYIEQKHGTEGLVFVDGWTGKGAITGELTRSLQGRPGYPELP HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC RLVVLADPCGCSWLSATDDDWLIPFGIMGAPVSGLVSRSLWSEKGLHGCVHCEHLQEFEC EEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SQLLVNTVADCRQQLDLSQIPAAEWDYQQNAALRIQSHQVVKKMAEQFEINSVNRIKPGI HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHCCCCH AEATRAVLRRVPDHVLVRHIDDPDVSLLVYLAKQKKIAIKEVGNELGQYRAITIIKKVI HHHHHHHHHHCCHHHHHCCCCCCCHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA