| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947858
Identifier: 153947858
GI number: 153947858
Start: 2124825
End: 2127221
Strand: Direct
Name: 153947858
Synonym: YpsIP31758_1836
Alternate gene names: NA
Gene position: 2124825-2127221 (Clockwise)
Preceding gene: 153949090
Following gene: 153949420
Centisome position: 44.99
GC content: 47.1
Gene sequence:
>2397_bases GTGGCGAAGAGAAAATCTACCGGTACCGGCTGGGTTATCCTACTGATAGTCGCTTTAGGGCTGATGACAGATATCCCAAG AGAAGCATGGGTTGCACTGAGTTTTGCTATTTTATGCCTGTTTTTTGTTTGGAAAAATATCCGTTGGGCTAAGATTGGTT CTGGACCGTCCATCAATTCAGACGTACCGAAAGCCTCAGCGATACCCGATCTGGGCGGTTATCAGCTAGACTCTCTGGCC CTTCATCCTGAACTCGTCATTGATGATGAGCTTACCGATCACCTTGATCAATCTGCTAGTGCTAAACCCTCTTCTGGTGA TAAACCCTCTGCGAGTACTAAACAGTCAGAAATTTCAAGAGGCTCTCTGGCCCGTGCGTCCTGGCTTCGCCCCGGCGAAT TAGCCGTGGTTGCCGGGATAACCTTAGCCGATGGCATGATCTACATTGGTAATAAACATAAGAGCAATCGTACCGGAGCA GAGCCGGCCTTTATCAACCCATCAATGCAGGTCGCCGAAGAAGAGGTAGACATTTCATTGGCGCTGATCGATAACGCCCC CGATTACTCGACATGTTCCCCGGAGGCGAGAAAAGCGTATTTGCAATGGTTATCGGAAGGTCGTAAATCTCCAATTGCTC ATATTAGTTATGTTTTCTTATTTTTTTATGGATTAGAGCACCGCGTACTGATTGATGCGAGTATTGATCCAATCGCAAAA CGAGAGCTGCCCATTATTGAGGCGGAAATTAACCGATTGCTGAATATTTATGGAAAAAATAACACTTTTAATCATTATGC TCAGAATTTATTAGGTTATATCGCCAGAGTCGATATAGAGGAGACGCTCTATTTATTGCCACCGCCATTAAGCCGAAATG CCTCAACCGAACTGCCACTTGCTTTGTTGGTTGGCTTAGGGCAATTGGCTGTGGACCAACGGCCATTACCTGCAGAGTGG GCCTGTGCGTGGGGGGTTGCGGATCCAGCCATTAACCAAAACAGATCCTTGATGCATTGTCCTGATGCCTTCTCCCAACT TTTCCAACAGCGCTATCGGGATAAATACGGCGATGGCTTTATCTTGCCCGTCAATAAAACCAAACTACATATTTTCTACC GTCCTGCTTCCACAGGATTAATGGGGCAAGAGTTCATCCAGCAGATGGGTGAGTTACCCAACGTGGCAGTATGTAAAGCC AATAGAGATAAGCTGCGGCCATTAATTGAAGCATGTCAGAACGATCTCGAGGCTTATAACCGCTTTGTGAGTTTGAATCC TAAGAAAAAAGCAGCATTAGAAGGGCTGTTACTTCTCCCGATGCCGTTGTGGCCAGAGGCATTAAACGCTGAGCTGGAAA GTATTAAAAGCCGAGTGGGCTATGGCTTACTGTTGATAACATTGGATGAACTTTTTGCCCAACTCAGCCATGCCTGCGCA TCAAACCCACTAGAACGTTTATCCCGCAATGTGGTCATTGCGCTGACTCAGGCGTTGGCATCCTTGCAGGTTGGTATAGA GCCTGATGTTCGGGCAGATAATCGTACACCAACCTTGCAAGATACAGTTGCTCTGTTTCCTATTGAGTCCGCGACGGCGG AGTCGGCAACCTTTGCCGTCTACCGTATCACGATGTTAGCCGTCGAGTTGGCTTGTGCCGCAGTGATGGTTGATGGCCGA GTTGGGGAACCCGAATCGATGATTTTGACGCGGCATATTGATGCCTGGAGCTACCTTAGCCCTGGTCAACGTATGCGTCT GAAAGCCTATCTTCAACCAGGGATCAGGAAGAATAATACGTTGTTGGCCTTGAAAAATAACCTTGAGCCGCTATCGCTTG AACATCGCCGTGCTATTGCCCGTTTCCTGGCACACCTGATTCAGGTCGAAGGGACCATTACCCCACAAGATGTGAAATTT CTTGAGCGGGTATATAAGCGTTTTGCCCTAGACAGCAAACTGGTTTATACCGATCTTGATAGCCGTGCGACCCCGATGAC ATTAAGTTTGCCGCCACCAGGTTCGGTAGCACTAAATAGTGTTGATCGCATTACGCTACTGAAAAATGAAAGTCAGGAAT TGGTGGCGCTGTTGGAGAATTTATTTCTAACCAAAGTGGTGGCGACAGAGGATAAAGAAGAGATTGATCCACAATCAATG GCGGCAATAATGGCTGATATGCAGGAAGGAACCGTGACGCTCCTACGATTACTGATTTCACGCAATGCATGGGAGCGTGA TAAATTAACCGATATCGCGCTGGACATGGAAATCAGACTGGACGATATACTGATTGAGATTAATCGCAAGATATTGGCTG TTTTTGACGTACCGCTGATTACTGGCGATGCGGTTATTTCAATTAATCGTGATGTCTCGGCTGCATTATTGGCCTGA
Upstream 100 bases:
>100_bases TGTTTTAAAAAAAGTTTTGTTTAAAAGAAGTATTTATTAAAAATTGCCAGTAAAGGCAGAATAAAAATTACTATTTTAAG ATAGGGGCAGATAAACCATC
Downstream 100 bases:
>100_bases TAAGCAGACAGTTGATTAATAAATATAGGCTCAATAAACATAGTCTTAATAAACATAGTCTTAATAAACATCGGCAGCGT AACTTGAGCTCAAACGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 798; Mature: 797
Protein sequence:
>798_residues MAKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLA LHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGA EPAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK RELPIIEAEINRLLNIYGKNNTFNHYAQNLLGYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEW ACAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASTGLMGQEFIQQMGELPNVAVCKA NRDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA SNPLERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGR VGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGIRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKF LERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
Sequences:
>Translated_798_residues MAKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLA LHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGA EPAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK RELPIIEAEINRLLNIYGKNNTFNHYAQNLLGYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEW ACAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASTGLMGQEFIQQMGELPNVAVCKA NRDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA SNPLERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGR VGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGIRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKF LERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA >Mature_797_residues AKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPKASAIPDLGGYQLDSLAL HPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAE PAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKR ELPIIEAEINRLLNIYGKNNTFNHYAQNLLGYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWA CAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHIFYRPASTGLMGQEFIQQMGELPNVAVCKAN RDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACAS NPLERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRV GEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGIRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFL ERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMA AIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88274; Mature: 88143
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINS CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC DVPKASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISR CCCCCCCCCCCCCCCCCCEEECCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHC GSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISL CCHHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHCCEEE ALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH RELPIIEAEINRLLNIYGKNNTFNHYAQNLLGYIARVDIEETLYLLPPPLSRNASTELPL CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCH ALLVGLGQLAVDQRPLPAEWACAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGF HHHHCCHHHHCCCCCCCHHHEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEE ILPVNKTKLHIFYRPASTGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLEAYN EEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH RFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA HHCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHC SNPLERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAV CCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCHHHHHH YRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGIRKNNT HHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCHHEEHHHHHCCCCCCCCE LLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLD EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC SRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM CCCCCEEEECCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLI HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHCCEEEEEEECCEE TGDAVISINRDVSAALLA CCCEEEEECCCCHHHHCC >Mature Secondary Structure AKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINS CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC DVPKASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISR CCCCCCCCCCCCCCCCCCEEECCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHC GSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISL CCHHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHCCEEE ALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH RELPIIEAEINRLLNIYGKNNTFNHYAQNLLGYIARVDIEETLYLLPPPLSRNASTELPL CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCH ALLVGLGQLAVDQRPLPAEWACAWGVADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGF HHHHCCHHHHCCCCCCCHHHEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEE ILPVNKTKLHIFYRPASTGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLEAYN EEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH RFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA HHCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHC SNPLERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAV CCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCHHHHHH YRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGIRKNNT HHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCHHEEHHHHHCCCCCCCCE LLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLD EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC SRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM CCCCCEEEECCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLI HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHCCEEEEEEECCEE TGDAVISINRDVSAALLA CCCEEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA