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The map label for this gene is ybjS [H]

Identifier: 153947735

GI number: 153947735

Start: 2415319

End: 2416281

Strand: Reverse

Name: ybjS [H]

Synonym: YpsIP31758_2103

Alternate gene names: 153947735

Gene position: 2416281-2415319 (Counterclockwise)

Preceding gene: 153950475

Following gene: 153947290

Centisome position: 51.16

GC content: 49.84

Gene sequence:

>963_bases
ATGACGAATATATTGATAACGGGCGCATCGGGGTTTATTGGCGGGGCATTTATGCGCCGCTTTGCCTGTCATGACGGGAT
TAGACTCTGTGGTATTGGGCGGCGCTCGGTAGAGGGTTTTCCCACGTCAGTGCGTTATCAGGCGCTGGATTTAGCCCGGC
TTGCAACACTGGATTTTACGCCAGATGTGGTTATTCATGCCGCCGGGCGAGCCGGGCCATGGGGAACCCGCCGTGAGTAC
TACCGTGATAACGTGGTCACTACAGAGCAGGTGATTAAATTCTGTCAGTCCAGAGGAAACCCACGGCTAATTTATCTTTC
GACTGCCGCGGTCTATTACCGTTACTGCCATCAACTGGCACTCACTGAACAGTCTGAGATCGGGCCTGAATTTGCCAATG
ATTATGCTCTCACGAAACATCAGGGTGAGGCGCTGATCGAGGCTTATCAGGGAGAGAAAACCATTTTGCGTCCTTGTGCC
GTATTTGGCCCTGGAGACCAACTGCTTTTCCCTCCCTTATTAGACGCGGCCAGTCGTCACGGGCTTCCTCTTTTAATTTC
TGAGGTGCCCGCACGCGGGGAATTAATGCATATCGATGTGCTGTGTGATTACCTGTTAAAAGCCGCCATTAAGCCGGAAC
TGCGCCCGTTCTATAATTTATCCAATGCAGAACCCATTGAAATTAATGAATTTCTTATTGATGTCTTGAGCAAGCTTGGC
CTCCCAGCACCTAAAAGAGAGGTTCGCGTAGCCACTGCAATGCTAATCGCCGGAATCATTGAAGGTACATATCGGTTATT
GCGTATTAAAAGTGAACCGTCCATCACCCGGTTTGGCGTTGGGGTTTTGGGCTATTCGAAAACATTGGATGTGAGTGCGG
CTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGCTGGTACAAGGAACAGAAA
TAA

Upstream 100 bases:

>100_bases
TTAGCTGGTTGGCGGTATTGCCCTGGCATGGGGAGCGGGCGTTATAGCGCAGTGGGTAAATGGGCACCAATCCACAGATG
TCGTCAGATAAAGGTGAGCG

Downstream 100 bases:

>100_bases
TGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGAAG
CAGGCAGGGTGTGGCGTACC

Product: NAD dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRREY
YRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCA
VFGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLG
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK

Sequences:

>Translated_320_residues
MTNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRREY
YRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCA
VFGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLG
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK
>Mature_319_residues
TNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRREYY
RDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAV
FGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLGL
PAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081792, Length=337, Percent_Identity=24.9258160237389, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35492; Mature: 35361

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFT
CCEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDVVIHAAGRAGPWGTRREYYRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLA
CCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
LTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAASRH
HCCHHHCCCHHHCCCCEECCCCHHHHHHHCCCCHHCCHHEEECCCCCCCCCHHHHHHHCC
GLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLG
CCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCC
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGS
CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHCHHHCCCCCCCCHHHHHHHCCC
PSRSLSQGLDAFIRWYKEQK
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNILITGASGFIGGAFMRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFT
CEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDVVIHAAGRAGPWGTRREYYRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLA
CCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
LTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAASRH
HCCHHHCCCHHHCCCCEECCCCHHHHHHHCCCCHHCCHHEEECCCCCCCCCHHHHHHHCC
GLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLG
CCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCC
LPAPKREVRVATAMLIAGIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGS
CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHCHHHCCCCCCCCHHHHHHHCCC
PSRSLSQGLDAFIRWYKEQK
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]