| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950475
Identifier: 153950475
GI number: 153950475
Start: 2416415
End: 2417701
Strand: Reverse
Name: 153950475
Synonym: YpsIP31758_2104
Alternate gene names: NA
Gene position: 2417701-2416415 (Counterclockwise)
Preceding gene: 153949072
Following gene: 153947735
Centisome position: 51.19
GC content: 51.98
Gene sequence:
>1287_bases ATGATCCCGTTTATGACGCTCTGGCACTATTTTCGTATCCGACGCCTGCACTTTGCCAACCGTAAAACGCTTGAAGCTTA TCAGGTCAAAAAACTTCAGCAATTTTCTCAACAGGTATTGGCTAATAGCCCTTGGTTCAGACGCTACGCCTCACAGCCGA TCACGGCGTGGCCACTGATGGATAAGCAACTGATGATGGAACATTTTGATGTGATGAACACGCAGGGTCTACACCGTGAC GTGCTGATGGCATGTGCGCTTGGCAGTGAGCAAGATCGCGATTTTTCACGTCAAACCGGGAAGTTCAGCGTTGGGTTATC ATCTGGCACCTCGGGCCAACGTGGTCTCTTTGTGGTCAGCCCTCAAGAACAGCAACTCTGGGCGGGGGGCATTCTGGCTA AAATGTTGCCCGATGGCGTATTCGCGGGTGAGCGTGTGGCGCTATTTCTGCGGGCGGATAATAACCTTTACCAAAGTGTT AACAACCGTTGGTTGAGTTTGGCGTTCTACGATCTTTTTCAGCCTTTTCAGTCTCACGCAGGTCTTCTGGAACAGCAGTC GCCGACGATTATCGTCGCACCGGCACAGGTGCTACGGGCGTTAGCGTTGGCGGTGATGCGCGGAGAACTGCACCTCACGG TTAAAAAGGTGATTTCTGTCGCCGAGGTGTTGGATGAACAGGATCGTCAACTCCTACAACAAGTTTTTGGTCACGTTGGT GAAGTCTATCAGGCGACAGAAGGCTTCTTAGCCGCCAGTTGTTCCCACGGCACTTTGCACCTGAATGAAGAATTTCTACA CATTGAACCGCAATGGATCGATGAGCGGCGCTTTACCCCAGTTATCACCGATTTTACGCGACAAACCCAACCTATCGTGC GTTACAAACTGGATGATGTGCTGGTAGTGAGCAATAAGCCCTGTCCTTGTGGCAACCCTGCGCGGGCGATTAGCCATATT GAAGGGCGTTGGGATGACCAGTTACTGCTTCCTGACCAGCAAGGCATATTGCAGGTGATATTTGCCGATCTCTGTAGTCG GGTATTGGCCACCGCGTTACCGCTGACGGCGGATTACCGTCTGATTCAGCGTGGCGACCATCATCTACATTTGATGGCCG ATTGCACGGCTAGCGAACTGGAGTGTTGTCGGCGTGCGATGGTATTGATGCTTCAGCAGCAGGGTATTGAGACCGAGAGG TTATGTTGGCAGTTAGAGGCAGTGGCCGTGATCCCACAATTTGATCGCAAAAGGCGGCGTATTATTCGTCAGGGCGTCGC AGGGTGA
Upstream 100 bases:
>100_bases TGATGGCAGACTCGCGTGCTTACTACCAAACGTTACAGCGGCTTAATCACTTATGGCGCACGGGGAAAACAGACATTCGG TTATGCCATGAGGGGGATTT
Downstream 100 bases:
>100_bases AAACAGGGCTATTTCTGGCACCCATCAAGGCGGTTAGCTGGTTGGCGGTATTGCCCTGGCATGGGGAGCGGGCGTTATAG CGCAGTGGGTAAATGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Co Synthetase; AMP-Dependent Synthetase And Ligase; CapK Protein
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLMDKQLMMEHFDVMNTQGLHRD VLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSV NNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDDVLVVSNKPCPCGNPARAISHI EGRWDDQLLLPDQQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETER LCWQLEAVAVIPQFDRKRRRIIRQGVAG
Sequences:
>Translated_428_residues MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLMDKQLMMEHFDVMNTQGLHRD VLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSV NNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDDVLVVSNKPCPCGNPARAISHI EGRWDDQLLLPDQQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETER LCWQLEAVAVIPQFDRKRRRIIRQGVAG >Mature_428_residues MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLMDKQLMMEHFDVMNTQGLHRD VLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSV NNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDDVLVVSNKPCPCGNPARAISHI EGRWDDQLLLPDQQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETER LCWQLEAVAVIPQFDRKRRRIIRQGVAG
Specific function: Unknown
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48860; Mature: 48860
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLM CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCC DKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVS CHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEC PQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHA CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHC GLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG CHHCCCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDDV HHHHHHCCCEEECCCCCEEEECCCEEEECCCHHCCCCCCCHHHHHHHCCCCHHEEECCCE LVVSNKPCPCGNPARAISHIEGRWDDQLLLPDQQGILQVIFADLCSRVLATALPLTADYR EEECCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH LIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRR HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH IIRQGVAG HHHHCCCC >Mature Secondary Structure MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLM CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCC DKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVS CHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEC PQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHA CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHC GLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG CHHCCCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDDV HHHHHHCCCEEECCCCCEEEECCCEEEECCCHHCCCCCCCHHHHHHHCCCCHHEEECCCE LVVSNKPCPCGNPARAISHIEGRWDDQLLLPDQQGILQVIFADLCSRVLATALPLTADYR EEECCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH LIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRR HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH IIRQGVAG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA