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The map label for this gene is yhjD [H]

Identifier: 153947665

GI number: 153947665

Start: 4569317

End: 4570402

Strand: Direct

Name: yhjD [H]

Synonym: YpsIP31758_4056

Alternate gene names: 153947665

Gene position: 4569317-4570402 (Clockwise)

Preceding gene: 153949377

Following gene: 153947184

Centisome position: 96.74

GC content: 47.7

Gene sequence:

>1086_bases
ATGCCGAACGCACCGAAAGATAAAGTCACACCACAGGTACGCAGTCAATCCACAGCCCCACTGGCTGTCGGGATTAAAAC
CGGCAAAAAAGCCATCTCTCATATGGCCCGCCTCAGTGATCGCATTAGAGCCTATCCCGCTATCGCCCATATTATTCGTG
CAACAGATCGTTTTAATGACCGGTTGGGGAGCCAATTTGGTGCCGCTATTACTTACTTTTCATTTCTGTCACTGATCCCA
ATTTTGATGGTCTCCTTTGCTACCGTCGGTTTTGTATTAGCGTCGAATCCCGATCTGTTGGCTGAATTAATTAACAAAAT
TGTGAATAGCATCAGTGACCCGGCACTGGCCACCACACTTAAAAATACGGTGAATACCGCAATCCAGCAACGCACCACCG
TTGGGCTGACCGGCTTAGCCATTGCGCTTTATTCCGGGATCAGTTGGATAGGGAACCTGCGCGAAGCGATTCGGGCGCAA
TCACGTGATGTCTGGGAACGTAATCCACAAGATAAGGAAAAATTCTATTACCGCTATGCCCGGGATTTTATCTCACTGAT
TGGGTTAGTGGTGGCGTTGATTGTCACACTCTCACTGACCTCCATTGCCGGTGCTGCCCAAGCGGCGATCGTCAATGCGT
TAGGTCTGGGGGGCATTGAATGGTTACGCCCAGCCATGACGTTAATCGCGCTATCAATTTCTATTGCCGCTAACTACCTG
TTATTTTTATGGATATTCTGGATATTACCGCGGAATAAGCCGAAGAAAAAAGCGCTGTTACGCGGAGCCCTCATTGCCGC
TATCGGTTTTGAAGTGATTAAATTTATCATGACCATGATGCTGCCGCGCCTCGCCAGTTCACCGTCTGGCGCAGCCTTTG
GCTCGGTGATTGGTTTAATGGCTTTCTTCTACTTTTTTGCCCGCCTAACCTTATTCTGTGCGGCTTGGATAGCCACTGCC
CATGATGTAGCGGACAACCGTGTTGAGGGCAAAGACATTATTGATGATAAAGACATTATTGAGGATAAAAATATTGAGGA
CCAAAACGTAGAAGACAAGAGTTTACCAACACGTGGAGAAAAGTAA

Upstream 100 bases:

>100_bases
GTCCGACTCTGCTATTATCAGCAGGCCATAAGTATTTTCTGTCATATTTTGTAGAATAATCATCTGCATAAGGCATGGGT
TAAGGCCAACGAGGAGAAAT

Downstream 100 bases:

>100_bases
CTTATGATTATGAAAAAATCATCAGTGTCACGCTCAATAAAATGGCGTAGATACTTACTGACATTGCTGATCTTGATCAT
ACTGGCTGCAGGCCTGATTT

Product: ribonuclease BN-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MPNAPKDKVTPQVRSQSTAPLAVGIKTGKKAISHMARLSDRIRAYPAIAHIIRATDRFNDRLGSQFGAAITYFSFLSLIP
ILMVSFATVGFVLASNPDLLAELINKIVNSISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQ
SRDVWERNPQDKEKFYYRYARDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIALSISIAANYL
LFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLASSPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATA
HDVADNRVEGKDIIDDKDIIEDKNIEDQNVEDKSLPTRGEK

Sequences:

>Translated_361_residues
MPNAPKDKVTPQVRSQSTAPLAVGIKTGKKAISHMARLSDRIRAYPAIAHIIRATDRFNDRLGSQFGAAITYFSFLSLIP
ILMVSFATVGFVLASNPDLLAELINKIVNSISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQ
SRDVWERNPQDKEKFYYRYARDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIALSISIAANYL
LFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLASSPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATA
HDVADNRVEGKDIIDDKDIIEDKNIEDQNVEDKSLPTRGEK
>Mature_360_residues
PNAPKDKVTPQVRSQSTAPLAVGIKTGKKAISHMARLSDRIRAYPAIAHIIRATDRFNDRLGSQFGAAITYFSFLSLIPI
LMVSFATVGFVLASNPDLLAELINKIVNSISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQS
RDVWERNPQDKEKFYYRYARDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIALSISIAANYLL
FLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLASSPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATAH
DVADNRVEGKDIIDDKDIIEDKNIEDQNVEDKSLPTRGEK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=302, Percent_Identity=70.5298013245033, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 39544; Mature: 39413

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNAPKDKVTPQVRSQSTAPLAVGIKTGKKAISHMARLSDRIRAYPAIAHIIRATDRFND
CCCCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGSQFGAAITYFSFLSLIPILMVSFATVGFVLASNPDLLAELINKIVNSISDPALATTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
KNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQDKEKFYYRYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIALSISIAANYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLASSPSGAAFGSVIGLM
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AFFYFFARLTLFCAAWIATAHDVADNRVEGKDIIDDKDIIEDKNIEDQNVEDKSLPTRGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure 
PNAPKDKVTPQVRSQSTAPLAVGIKTGKKAISHMARLSDRIRAYPAIAHIIRATDRFND
CCCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGSQFGAAITYFSFLSLIPILMVSFATVGFVLASNPDLLAELINKIVNSISDPALATTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
KNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQDKEKFYYRYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIALSISIAANYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLASSPSGAAFGSVIGLM
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AFFYFFARLTLFCAAWIATAHDVADNRVEGKDIIDDKDIIEDKNIEDQNVEDKSLPTRGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]