| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is glxK [H]
Identifier: 153949377
GI number: 153949377
Start: 4562668
End: 4563804
Strand: Direct
Name: glxK [H]
Synonym: YpsIP31758_4052
Alternate gene names: 153949377
Gene position: 4562668-4563804 (Clockwise)
Preceding gene: 153948844
Following gene: 153947665
Centisome position: 96.6
GC content: 52.86
Gene sequence:
>1137_bases ATGAAAATTATTATTGCTCCCGATTCATTTAAAGAAAGCCTCACCGCCATGCAGGTTGCCGAGGCCATTGAGCAAGGCTT CAGCGAGATTTTCCCGCAGGCCGAATATATAAAGCTGCCAATGGCCGATGGCGGCGAAGGTACCGTTGAATCAATGGTTG CAGCCACTGGTGGAGAGTTAGTTAACGTAGAGGTTACCGGCCCATTGGGTGTTCCGGTTAAGGCCTTTTACGGTTGGATG GGCGATGGCGAAACGGCGGTGATTGAAATGGCGGCGGCATCTGGCCTACATTTAGTGGCACCAGAGCAGCGCAATCCACT GATTACCACCAGCTACGGTACTGGCGAACTGATTTTGGCGGCGCTGAATCACGGGGCGCGCAAAATTATTCTCGGCATCG GAGGCAGTGCCACCAATGATGGCGGCGCAGGCATGATGCAAGCATTGGGCGTACAGCTTAGTGATCAACAAGGTAAAGCG CTCACGGTTGGCGGGGCGGCATTAGTGCAATTGGTCGATATTGATCTCAGCCAGTTGGATGATCGTTTGGCACAAACCGA TATTCTGGTCGCCTGCGATGTAGATAACCCATTGTGTGGTGCGAAAGGCGCATCGGCAGTGTTCGGTCCACAGAAAGGGG CGACGCCAGAACGCGTGCAACAATTGGACGCGGCGTTGCAGCATTATGGTGAGAAAATCGAGCAAGTTACTGGGAAATCC GTCATTAACGTGGCCGGTGCCGGTGCTGCTGGCGGTATGGGCGCGGCGCTGTTCGGTTTACTGAATGCACGGTTACAACC GGGGATTGAGATAGTCACCGAAGCGCTAAAATTAGCGGCTGCCGTGCAAGAGGCTGATTTAGTCATTACCGGAGAAGGGC GCATCGATAGCCAAACCATTCACGGTAAAACGCCGGTCGGGGTGGCGCGAGTCGCGAAGCGTTTTGATATTCCTGTCATT GCTATCGCTGGCAGCATGGCACCGGATTATGAGGTGGTACATCAACATGGGTTAGATGCGGTATTTTCAGTTCTCAACCA TATTCAAACGCTACCAGAAGCACTGGAAGAGGCGAGTGATAATATTCGTATCACGGCGCGTAACGTTGCTGCTGTCTGGA AAATGGGCAGAAGTTAA
Upstream 100 bases:
>100_bases CTAAAACTGCTGCCCTATGAGACCGCCGTGGGTTTGATGATCGCCTTTGTCTCTACGCTGATGTTTGGCGTGTTTAATTT AGCGGGTTAAAGAGGTACGC
Downstream 100 bases:
>100_bases TTTTGCCCACCTGGCTCGCCGCACCTTAAAATACGACAGATAAAATTATAGGCAGCCATAAAAATAGTGATCTCAAAACG TCCATCACCAGGGACTTTAT
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATGGELVNVEVTGPLGVPVKAFYGWM GDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILAALNHGARKIILGIGGSATNDGGAGMMQALGVQLSDQQGKA LTVGGAALVQLVDIDLSQLDDRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAAAVQEADLVITGEGRIDSQTIHGKTPVGVARVAKRFDIPVI AIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASDNIRITARNVAAVWKMGRS
Sequences:
>Translated_378_residues MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATGGELVNVEVTGPLGVPVKAFYGWM GDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILAALNHGARKIILGIGGSATNDGGAGMMQALGVQLSDQQGKA LTVGGAALVQLVDIDLSQLDDRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAAAVQEADLVITGEGRIDSQTIHGKTPVGVARVAKRFDIPVI AIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASDNIRITARNVAAVWKMGRS >Mature_378_residues MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATGGELVNVEVTGPLGVPVKAFYGWM GDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILAALNHGARKIILGIGGSATNDGGAGMMQALGVQLSDQQGKA LTVGGAALVQLVDIDLSQLDDRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAAAVQEADLVITGEGRIDSQTIHGKTPVGVARVAKRFDIPVI AIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASDNIRITARNVAAVWKMGRS
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=377, Percent_Identity=60.4774535809019, Blast_Score=420, Evalue=1e-119, Organism=Escherichia coli, GI145693185, Length=376, Percent_Identity=61.1702127659574, Blast_Score=410, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39073; Mature: 39073
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATGGEL CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCE VNVEVTGPLGVPVKAFYGWMGDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILA EEEEEECCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCHHHHE ALNHGARKIILGIGGSATNDGGAGMMQALGVQLSDQQGKALTVGGAALVQLVDIDLSQLD ECCCCCEEEEEECCCCCCCCCCHHHHHHHCCEECCCCCCEEEECHHHHHHHHHCCHHHHH DRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAAAVQEADLVITGEGRIDSQTI HEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEE HGKTPVGVARVAKRFDIPVIAIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASD CCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC NIRITARNVAAVWKMGRS CEEEEEHHHHHHHHCCCC >Mature Secondary Structure MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATGGEL CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCE VNVEVTGPLGVPVKAFYGWMGDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILA EEEEEECCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCHHHHE ALNHGARKIILGIGGSATNDGGAGMMQALGVQLSDQQGKALTVGGAALVQLVDIDLSQLD ECCCCCEEEEEECCCCCCCCCCHHHHHHHCCEECCCCCCEEEECHHHHHHHHHCCHHHHH DRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAAAVQEADLVITGEGRIDSQTI HEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEE HGKTPVGVARVAKRFDIPVIAIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASD CCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC NIRITARNVAAVWKMGRS CEEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]