| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is ywbL [H]
Identifier: 153947613
GI number: 153947613
Start: 2461630
End: 2463549
Strand: Reverse
Name: ywbL [H]
Synonym: YpsIP31758_2141
Alternate gene names: 153947613
Gene position: 2463549-2461630 (Counterclockwise)
Preceding gene: 153950075
Following gene: 153947156
Centisome position: 52.16
GC content: 47.76
Gene sequence:
>1920_bases ATGCGCATTTGGCAAAAATTCTTGCTGCTCTTCTGCTGTTGGGTGTTATCTGGTCCGCTAGTGTGGGCTTCAACAGACTA CTCACTGTGGGTTAATGATATTCAATCCCGGTTAGATAAAACGGCTCAGTTGTATCAACAACAAAAAACTGATGAAGCGA GAGCAATGGTACAGATGGCGTATTTTGAGGTGTTTGAAAACCTTGAGGGGCCGATTCGTATCAACATCTCCGCGCAAAAA AGCTTCCAGATGGAGGCGGCCTTTGGCGAAATAAGGCGGATGATTGGTGAAGGCAAATCACAGGCTGATGTCGATAATAA AATCAATTGGTTGAAAGGCGAACTAACGGGTGTCTTGCCCGTGTTAGTTGATGGACACAAACTCACTGCTGAGCAGCAAC ACGCTGCTTATGAAAACAGCGATATTGCCGTATATTGGCAACAGAGCTTTAGAATTATTGATGATTTATTGGCGCAAGCT ATCAGTGAATATCAGGACGGCAAATATGCCGAAGCCAGTAAAAGTGTGCAGCAGGCGCATTATCAGGGGTTTAAAAACTC TGAAATGGAGATGTCGGTGCGGGGAAATCGCTCGGCACAGCAAGCAGCGGAGATAAATCAGCAATTTACCGCCTTGATCG ATTTGGCGCGCCAGCCCGATAAAATGACCGAAGTGGCCTATCGTGTCACCGGGTTGCTACACACCATTGAAGACATCTTA CCGGGCTTACCAACCACTCGCGAACAACAACAAATTACTGTTGACCAACCCATCTCTTCCGACGCCATCCCCGATACACA AGCTAATGCTGATTGGGCGCAGGTATCCAGCAAAATCAATCAAGCGGTTACTGAGGCTATCGGGCAATACCAGCAAGGGA AAATAACACCGGCAATGATGGCGGTGCAGGATGCCTACTTTGACTTGTTCGAAGCCAGTGGCATGGAAAACAAGGTGGGA TCGCGTGATGCAGCATTTAAATCAACGTTAGAAGGCCACTTCACCCGCTTAGTTGGTTTAATGAAAGCTGAGAAACCGGT TGAGCAACTACAAGCCGAAGCGGTTGCCTTGCAAAAAGATCTGGTCAATGCAGCCGAGATGCTGGGTGATGGCGGAGAGA CCGACTGGAGTCTGTTCGTTTACAGTTTGTTGATCATTGTACGTGAAGGGCTGGAGGCATTACTGATTGTTGCGGCCATT GTCGCTTATTTGGTGAAGAACAACCATCAGGACAAATTGCCGTTGATTCGTCAATCGGTGGTGGTGGCACTCATCGCCAG CGTATTAACGGCATTCATCTTCCAATGGTTGTTTGCCAACTCTGGCCAAAGCCGCGAGTTGTTGGAGGGGTTCACCATGA TGATTGCGGTGGTGATGCTGTTCTCCATGAGTTATTGGTTGTTATCGAAGGCTGAAGCCCGTAATTGGAAGGCGTACCTC GAAGGAAAATTCGCTAAATCACTTAGCAGTGGATCAATAATAGGTTTATGGCTCACTAGCTTCCTGGCGGTATACCGAGA AGGGGCGGAGACCGTTCTGTTCTACCTCGCATTGATAGGCGATGCCAATACCACCAGCGGCCACTTATCGGTTCTGGCCG GTTTTGGCGTTGGTTGTGTGATCTTGCTGGTGGCTTATTTGGTGATGCGCTTTACCGTGGTCAAACTGCCACTTAAACCA TTCTTTATATTTACCGGTGGCTTTATGTACCTGATGGCATTTGTTTTTGCCGGTAAAAGTGTTCTGGAACTGATCGAAGG TAAATTGTTTGAACCCACTTTACTGCCGGGTGTACCTGAAATTAGTTGGTTGGGCATCTATCCTTATGTGGAAACGCTGA TCCCACAAGGCGTGTTACTGATTGCAGCATTAGTTGCCCTTTGGGTTATGCAATGGCGTAGTCGGACGGTTCACCGCTAA
Upstream 100 bases:
>100_bases CAGAAGGTTAAATGTTTCTTGATACTGGTCAAGACACATTTCCTTTGTTTAGTGTTAATGTTAATAAATCTCATTATTAA CTTCATGTACATTAATCATT
Downstream 100 bases:
>100_bases GGGACTGTTGACCACAGAGGAATCGTTGGTCACAGAAAAATCGTTGGCTATTGAAGGGCGATTCACCATTTAAGGGATAT TCATTATTAAAGAGTATCCC
Product: FTR1 family iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MRIWQKFLLLFCCWVLSGPLVWASTDYSLWVNDIQSRLDKTAQLYQQQKTDEARAMVQMAYFEVFENLEGPIRINISAQK SFQMEAAFGEIRRMIGEGKSQADVDNKINWLKGELTGVLPVLVDGHKLTAEQQHAAYENSDIAVYWQQSFRIIDDLLAQA ISEYQDGKYAEASKSVQQAHYQGFKNSEMEMSVRGNRSAQQAAEINQQFTALIDLARQPDKMTEVAYRVTGLLHTIEDIL PGLPTTREQQQITVDQPISSDAIPDTQANADWAQVSSKINQAVTEAIGQYQQGKITPAMMAVQDAYFDLFEASGMENKVG SRDAAFKSTLEGHFTRLVGLMKAEKPVEQLQAEAVALQKDLVNAAEMLGDGGETDWSLFVYSLLIIVREGLEALLIVAAI VAYLVKNNHQDKLPLIRQSVVVALIASVLTAFIFQWLFANSGQSRELLEGFTMMIAVVMLFSMSYWLLSKAEARNWKAYL EGKFAKSLSSGSIIGLWLTSFLAVYREGAETVLFYLALIGDANTTSGHLSVLAGFGVGCVILLVAYLVMRFTVVKLPLKP FFIFTGGFMYLMAFVFAGKSVLELIEGKLFEPTLLPGVPEISWLGIYPYVETLIPQGVLLIAALVALWVMQWRSRTVHR
Sequences:
>Translated_639_residues MRIWQKFLLLFCCWVLSGPLVWASTDYSLWVNDIQSRLDKTAQLYQQQKTDEARAMVQMAYFEVFENLEGPIRINISAQK SFQMEAAFGEIRRMIGEGKSQADVDNKINWLKGELTGVLPVLVDGHKLTAEQQHAAYENSDIAVYWQQSFRIIDDLLAQA ISEYQDGKYAEASKSVQQAHYQGFKNSEMEMSVRGNRSAQQAAEINQQFTALIDLARQPDKMTEVAYRVTGLLHTIEDIL PGLPTTREQQQITVDQPISSDAIPDTQANADWAQVSSKINQAVTEAIGQYQQGKITPAMMAVQDAYFDLFEASGMENKVG SRDAAFKSTLEGHFTRLVGLMKAEKPVEQLQAEAVALQKDLVNAAEMLGDGGETDWSLFVYSLLIIVREGLEALLIVAAI VAYLVKNNHQDKLPLIRQSVVVALIASVLTAFIFQWLFANSGQSRELLEGFTMMIAVVMLFSMSYWLLSKAEARNWKAYL EGKFAKSLSSGSIIGLWLTSFLAVYREGAETVLFYLALIGDANTTSGHLSVLAGFGVGCVILLVAYLVMRFTVVKLPLKP FFIFTGGFMYLMAFVFAGKSVLELIEGKLFEPTLLPGVPEISWLGIYPYVETLIPQGVLLIAALVALWVMQWRSRTVHR >Mature_639_residues MRIWQKFLLLFCCWVLSGPLVWASTDYSLWVNDIQSRLDKTAQLYQQQKTDEARAMVQMAYFEVFENLEGPIRINISAQK SFQMEAAFGEIRRMIGEGKSQADVDNKINWLKGELTGVLPVLVDGHKLTAEQQHAAYENSDIAVYWQQSFRIIDDLLAQA ISEYQDGKYAEASKSVQQAHYQGFKNSEMEMSVRGNRSAQQAAEINQQFTALIDLARQPDKMTEVAYRVTGLLHTIEDIL PGLPTTREQQQITVDQPISSDAIPDTQANADWAQVSSKINQAVTEAIGQYQQGKITPAMMAVQDAYFDLFEASGMENKVG SRDAAFKSTLEGHFTRLVGLMKAEKPVEQLQAEAVALQKDLVNAAEMLGDGGETDWSLFVYSLLIIVREGLEALLIVAAI VAYLVKNNHQDKLPLIRQSVVVALIASVLTAFIFQWLFANSGQSRELLEGFTMMIAVVMLFSMSYWLLSKAEARNWKAYL EGKFAKSLSSGSIIGLWLTSFLAVYREGAETVLFYLALIGDANTTSGHLSVLAGFGVGCVILLVAYLVMRFTVVKLPLKP FFIFTGGFMYLMAFVFAGKSVLELIEGKLFEPTLLPGVPEISWLGIYPYVETLIPQGVLLIAALVALWVMQWRSRTVHR
Specific function: Unknown
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 71357; Mature: 71357
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIWQKFLLLFCCWVLSGPLVWASTDYSLWVNDIQSRLDKTAQLYQQQKTDEARAMVQMA CCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFEVFENLEGPIRINISAQKSFQMEAAFGEIRRMIGEGKSQADVDNKINWLKGELTGVLP HHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VLVDGHKLTAEQQHAAYENSDIAVYWQQSFRIIDDLLAQAISEYQDGKYAEASKSVQQAH HHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YQGFKNSEMEMSVRGNRSAQQAAEINQQFTALIDLARQPDKMTEVAYRVTGLLHTIEDIL HCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH PGLPTTREQQQITVDQPISSDAIPDTQANADWAQVSSKINQAVTEAIGQYQQGKITPAMM CCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH AVQDAYFDLFEASGMENKVGSRDAAFKSTLEGHFTRLVGLMKAEKPVEQLQAEAVALQKD HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LVNAAEMLGDGGETDWSLFVYSLLIIVREGLEALLIVAAIVAYLVKNNHQDKLPLIRQSV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VVALIASVLTAFIFQWLFANSGQSRELLEGFTMMIAVVMLFSMSYWLLSKAEARNWKAYL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH EGKFAKSLSSGSIIGLWLTSFLAVYREGAETVLFYLALIGDANTTSGHLSVLAGFGVGCV HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ILLVAYLVMRFTVVKLPLKPFFIFTGGFMYLMAFVFAGKSVLELIEGKLFEPTLLPGVPE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC ISWLGIYPYVETLIPQGVLLIAALVALWVMQWRSRTVHR CCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIWQKFLLLFCCWVLSGPLVWASTDYSLWVNDIQSRLDKTAQLYQQQKTDEARAMVQMA CCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFEVFENLEGPIRINISAQKSFQMEAAFGEIRRMIGEGKSQADVDNKINWLKGELTGVLP HHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VLVDGHKLTAEQQHAAYENSDIAVYWQQSFRIIDDLLAQAISEYQDGKYAEASKSVQQAH HHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YQGFKNSEMEMSVRGNRSAQQAAEINQQFTALIDLARQPDKMTEVAYRVTGLLHTIEDIL HCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH PGLPTTREQQQITVDQPISSDAIPDTQANADWAQVSSKINQAVTEAIGQYQQGKITPAMM CCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH AVQDAYFDLFEASGMENKVGSRDAAFKSTLEGHFTRLVGLMKAEKPVEQLQAEAVALQKD HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LVNAAEMLGDGGETDWSLFVYSLLIIVREGLEALLIVAAIVAYLVKNNHQDKLPLIRQSV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VVALIASVLTAFIFQWLFANSGQSRELLEGFTMMIAVVMLFSMSYWLLSKAEARNWKAYL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH EGKFAKSLSSGSIIGLWLTSFLAVYREGAETVLFYLALIGDANTTSGHLSVLAGFGVGCV HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ILLVAYLVMRFTVVKLPLKPFFIFTGGFMYLMAFVFAGKSVLELIEGKLFEPTLLPGVPE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC ISWLGIYPYVETLIPQGVLLIAALVALWVMQWRSRTVHR CCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]