Click here to switch to the map view.

The map label for this gene is yhjA [H]

Identifier: 153947570

GI number: 153947570

Start: 3689324

End: 3690703

Strand: Direct

Name: yhjA [H]

Synonym: YpsIP31758_3278

Alternate gene names: 153947570

Gene position: 3689324-3690703 (Clockwise)

Preceding gene: 153947192

Following gene: 153947091

Centisome position: 78.11

GC content: 46.74

Gene sequence:

>1380_bases
GTGATAAGAAGAGGATTAATTGGTGGCGGTATATTGGTAATTGCAGGTTATCTGGGTATTGCTGGCTATCTTTATATGAC
AGATAACACACGTAATAACACCTTCATCAGCGAGGCAAAAACACCCAATCAGCAGGTCAGTAATATTCTTTACCAAAAAG
GGTGTGATTATTGCCATACCGCGAATGCATCCCTGCCATTTTATGCCGCTATCCCCGGCCCTAAACAACTGATGGACTAT
GACATTCGACAAGGTAACCAGCATTTCTCATTGGAGCCAACACTATTAGCATTAAAAGAAAATCGTGCCGTTCCTGAAGC
AGATTTAGCCAAAATAGAATCGGCTATTGCTCGCGATCAAATGCCACCTCAACGCTTTAGCGCATTACATTGGTCCTCCA
GCATCAACGCTGAGGAGCGAAACCAGATCCTTGATTGGGTCAAAATACAACGGACGACATACTTCCCTTCCAATAGCCAC
AGCGAAATGCAGCACTTAGCACTACAGCCGATCCCCGATGCCTTGCTGGTCGACAACCAAAAAGTGGCACTAGGTTCCCG
CCTGTTCCATGACCCCAGATTATCCGGTGATAACTCTATTTCCTGTGCCAGTTGCCATCTGTTGAACAAAGGAGGCGTTG
ATAATCTGGCGACCTCAACGGGTGTCGATGGACAAAAAGGTGGGATCAACGCGCCTACGGTATTTAATGCCGTATTTAAC
GTGGAGCAGTTTTGGGATGGCCGTGCCGTTGATTTGCAGCAACAAGCCGGTGGACCACCACTTAACCCAGTAGAAATGGC
CTCGACCTCTTGGGAAGATATAATTGCTAAATTGCAACAAGACCCACAGTTGACCCAGGACTTTGCCCAAGTGTATCCGC
AAGGCTATTCTGAAGACACGATCACCGATGCAATCGCTGAATTTGAGAAAACCCTGACCACCCCCAACAGCCCTTTCGAC
CACTATCTGAAAGGTGAAACACAGGCATTAACGACTAGCCAGCAAAAAGGCTTGGCGCTATTCCAGCAAAATAAATGTGA
TACCTGCCACGTCGGTAAAAATATTGGTGGGCAGTCCTATGAGTTCTTGGGGCTAAAAAGTGACTATTTCGCTGATCGCC
AAAAAGAGCAAACTACCGATGACCTCGGGCGTTTCAACGTCACCAACGATCCACGCGATATGCACCGCTTTAAAACACCG
AGCTTGCGTAATATTGCCTTAACAGCCCCTTATTTTCACGATGCACAAGCTAAAGATTTACATCAGGCGGTTGAGCTAAT
GCTCAAATATCAGGTAGGGACCCAACTACCAGAACAGGATATCAACGATATCGTGGCCTTCCTGGAAAGTTTGACCGGGG
AATATATTCCTCATTCCTGA

Upstream 100 bases:

>100_bases
AATAAGGTTATTGGCAGACTGAGAAAAATAAACGTGAACGTCGGCTGATGCTATCCATAGAGCAAACCAGGTACTTTCCA
CACAACAAAGGAGTGCAGCT

Downstream 100 bases:

>100_bases
GCAATATACAGTAGGATAATTTACCCTGATTGACCTTAATGGGCTCTTATAAAAAATAACAGGAATGCAGATGAAAAAAT
TATCTTTGGGAATAATGGTA

Product: cytochrome C peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MIRRGLIGGGILVIAGYLGIAGYLYMTDNTRNNTFISEAKTPNQQVSNILYQKGCDYCHTANASLPFYAAIPGPKQLMDY
DIRQGNQHFSLEPTLLALKENRAVPEADLAKIESAIARDQMPPQRFSALHWSSSINAEERNQILDWVKIQRTTYFPSNSH
SEMQHLALQPIPDALLVDNQKVALGSRLFHDPRLSGDNSISCASCHLLNKGGVDNLATSTGVDGQKGGINAPTVFNAVFN
VEQFWDGRAVDLQQQAGGPPLNPVEMASTSWEDIIAKLQQDPQLTQDFAQVYPQGYSEDTITDAIAEFEKTLTTPNSPFD
HYLKGETQALTTSQQKGLALFQQNKCDTCHVGKNIGGQSYEFLGLKSDYFADRQKEQTTDDLGRFNVTNDPRDMHRFKTP
SLRNIALTAPYFHDAQAKDLHQAVELMLKYQVGTQLPEQDINDIVAFLESLTGEYIPHS

Sequences:

>Translated_459_residues
MIRRGLIGGGILVIAGYLGIAGYLYMTDNTRNNTFISEAKTPNQQVSNILYQKGCDYCHTANASLPFYAAIPGPKQLMDY
DIRQGNQHFSLEPTLLALKENRAVPEADLAKIESAIARDQMPPQRFSALHWSSSINAEERNQILDWVKIQRTTYFPSNSH
SEMQHLALQPIPDALLVDNQKVALGSRLFHDPRLSGDNSISCASCHLLNKGGVDNLATSTGVDGQKGGINAPTVFNAVFN
VEQFWDGRAVDLQQQAGGPPLNPVEMASTSWEDIIAKLQQDPQLTQDFAQVYPQGYSEDTITDAIAEFEKTLTTPNSPFD
HYLKGETQALTTSQQKGLALFQQNKCDTCHVGKNIGGQSYEFLGLKSDYFADRQKEQTTDDLGRFNVTNDPRDMHRFKTP
SLRNIALTAPYFHDAQAKDLHQAVELMLKYQVGTQLPEQDINDIVAFLESLTGEYIPHS
>Mature_459_residues
MIRRGLIGGGILVIAGYLGIAGYLYMTDNTRNNTFISEAKTPNQQVSNILYQKGCDYCHTANASLPFYAAIPGPKQLMDY
DIRQGNQHFSLEPTLLALKENRAVPEADLAKIESAIARDQMPPQRFSALHWSSSINAEERNQILDWVKIQRTTYFPSNSH
SEMQHLALQPIPDALLVDNQKVALGSRLFHDPRLSGDNSISCASCHLLNKGGVDNLATSTGVDGQKGGINAPTVFNAVFN
VEQFWDGRAVDLQQQAGGPPLNPVEMASTSWEDIIAKLQQDPQLTQDFAQVYPQGYSEDTITDAIAEFEKTLTTPNSPFD
HYLKGETQALTTSQQKGLALFQQNKCDTCHVGKNIGGQSYEFLGLKSDYFADRQKEQTTDDLGRFNVTNDPRDMHRFKTP
SLRNIALTAPYFHDAQAKDLHQAVELMLKYQVGTQLPEQDINDIVAFLESLTGEYIPHS

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=461, Percent_Identity=55.0976138828633, Blast_Score=513, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 51015; Mature: 51015

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS51007 CYTC L=RR ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRGLIGGGILVIAGYLGIAGYLYMTDNTRNNTFISEAKTPNQQVSNILYQKGCDYCHT
CCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCHHCC
ANASLPFYAAIPGPKQLMDYDIRQGNQHFSLEPTLLALKENRAVPEADLAKIESAIARDQ
CCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
MPPQRFSALHWSSSINAEERNQILDWVKIQRTTYFPSNSHSEMQHLALQPIPDALLVDNQ
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCEEECCC
KVALGSRLFHDPRLSGDNSISCASCHLLNKGGVDNLATSTGVDGQKGGINAPTVFNAVFN
CHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHH
VEQFWDGRAVDLQQQAGGPPLNPVEMASTSWEDIIAKLQQDPQLTQDFAQVYPQGYSEDT
HHHHCCCCCEEHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
ITDAIAEFEKTLTTPNSPFDHYLKGETQALTTSQQKGLALFQQNKCDTCHVGKNIGGQSY
HHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCHHCCCHHHHCCCCCEEECCCCCCCCCE
EFLGLKSDYFADRQKEQTTDDLGRFNVTNDPRDMHRFKTPSLRNIALTAPYFHDAQAKDL
EEECCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHH
HQAVELMLKYQVGTQLPEQDINDIVAFLESLTGEYIPHS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIRRGLIGGGILVIAGYLGIAGYLYMTDNTRNNTFISEAKTPNQQVSNILYQKGCDYCHT
CCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCHHCC
ANASLPFYAAIPGPKQLMDYDIRQGNQHFSLEPTLLALKENRAVPEADLAKIESAIARDQ
CCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
MPPQRFSALHWSSSINAEERNQILDWVKIQRTTYFPSNSHSEMQHLALQPIPDALLVDNQ
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCEEECCC
KVALGSRLFHDPRLSGDNSISCASCHLLNKGGVDNLATSTGVDGQKGGINAPTVFNAVFN
CHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHH
VEQFWDGRAVDLQQQAGGPPLNPVEMASTSWEDIIAKLQQDPQLTQDFAQVYPQGYSEDT
HHHHCCCCCEEHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
ITDAIAEFEKTLTTPNSPFDHYLKGETQALTTSQQKGLALFQQNKCDTCHVGKNIGGQSY
HHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCHHCCCHHHHCCCCCEEECCCCCCCCCE
EFLGLKSDYFADRQKEQTTDDLGRFNVTNDPRDMHRFKTPSLRNIALTAPYFHDAQAKDL
EEECCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHH
HQAVELMLKYQVGTQLPEQDINDIVAFLESLTGEYIPHS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]