| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is map2 [H]
Identifier: 153947192
GI number: 153947192
Start: 3683847
End: 3684632
Strand: Direct
Name: map2 [H]
Synonym: YpsIP31758_3273
Alternate gene names: 153947192
Gene position: 3683847-3684632 (Clockwise)
Preceding gene: 153947666
Following gene: 153947570
Centisome position: 77.99
GC content: 50.64
Gene sequence:
>786_bases ATGACCGAAGTCAAAATCCACTCACCGGCAGAGATTGAAATGGCCCGTGCGGCTGGTCAAGCCGCCGCGAAAGTGCTTGA AATGATAAAACCCTATGTTCTTGCTGGGATAACGACCGATGAAATTGATCGGCTATGCCACGATTATATCGTTAACGAAC TGAAGGTTATTCCCGCAAACATTGGCTATCACGGTTATACCCGAACGGTGTGTACCTCGGTCAATCATGTGGTCTGTCAC GGGATCCCATCCGATAAAAAACTCAAGAACGGCGATATTGTGAATATCGATGTGGCGATCATCAAAGAGGGTTGGTATGG CGATACCAGCAGAATGTACTTTGTTGGGGAACCCTCAGTCCGGGCCAAACGTCTGGTCGATATTACCTATCAATCCATGG TGGCTGGCATTAAAGCCGTCCGCCCTGGTGCGACGCTTGGCGACATCGGTGCAAGCATTCAACAGTTGGCTGAGGGCGCA GGATTTTCTGTAGTGAGAGAATATTGTGGCCACGGTGTGGGTCAGGAATATCATACTGCACCACAGGTTTTGCACTATGG TATAGCCCAAACGGGCATGCTGCTTAAACCTGGTATGATTTTTACTATCGAACCGATGATTAATGCCGGAAAAGCGGCGA CCAGCGTACTTTCTGACGGCTGGACGGTTGTGACCAAAGACCGTTCGCTTTCGGCACAGTGGGAACACACCATTGCCGTT ACCGAATCGGGATACGACCTGCTGACGCCCTGGCCTGAAGGCACTGGCGAATACGAAGCCATCTGA
Upstream 100 bases:
>100_bases TGGCCCGTGCACTTGTGCAGGTTGAACTGCAAGGCGGAGCGGATATTGCCAAAATGATCTATCCCGACGCTCTTACGCTG AATAATGGAGAGAAAGCGCA
Downstream 100 bases:
>100_bases TATCGGCTGTTACCAAACATTTTCATCTGACCAAACATTGTTACCTGAACAAACATTGTTACCTGAACAAACATTGTCAC CTAACCAAACATTGTTACCT
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTEVKIHSPAEIEMARAAGQAAAKVLEMIKPYVLAGITTDEIDRLCHDYIVNELKVIPANIGYHGYTRTVCTSVNHVVCH GIPSDKKLKNGDIVNIDVAIIKEGWYGDTSRMYFVGEPSVRAKRLVDITYQSMVAGIKAVRPGATLGDIGASIQQLAEGA GFSVVREYCGHGVGQEYHTAPQVLHYGIAQTGMLLKPGMIFTIEPMINAGKAATSVLSDGWTVVTKDRSLSAQWEHTIAV TESGYDLLTPWPEGTGEYEAI
Sequences:
>Translated_261_residues MTEVKIHSPAEIEMARAAGQAAAKVLEMIKPYVLAGITTDEIDRLCHDYIVNELKVIPANIGYHGYTRTVCTSVNHVVCH GIPSDKKLKNGDIVNIDVAIIKEGWYGDTSRMYFVGEPSVRAKRLVDITYQSMVAGIKAVRPGATLGDIGASIQQLAEGA GFSVVREYCGHGVGQEYHTAPQVLHYGIAQTGMLLKPGMIFTIEPMINAGKAATSVLSDGWTVVTKDRSLSAQWEHTIAV TESGYDLLTPWPEGTGEYEAI >Mature_260_residues TEVKIHSPAEIEMARAAGQAAAKVLEMIKPYVLAGITTDEIDRLCHDYIVNELKVIPANIGYHGYTRTVCTSVNHVVCHG IPSDKKLKNGDIVNIDVAIIKEGWYGDTSRMYFVGEPSVRAKRLVDITYQSMVAGIKAVRPGATLGDIGASIQQLAEGAG FSVVREYCGHGVGQEYHTAPQVLHYGIAQTGMLLKPGMIFTIEPMINAGKAATSVLSDGWTVVTKDRSLSAQWEHTIAVT ESGYDLLTPWPEGTGEYEAI
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=248, Percent_Identity=41.1290322580645, Blast_Score=213, Evalue=1e-55, Organism=Homo sapiens, GI40385867, Length=250, Percent_Identity=37.6, Blast_Score=186, Evalue=3e-47, Organism=Escherichia coli, GI1786364, Length=253, Percent_Identity=56.9169960474308, Blast_Score=317, Evalue=5e-88, Organism=Escherichia coli, GI1788728, Length=211, Percent_Identity=26.0663507109005, Blast_Score=68, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71996291, Length=255, Percent_Identity=39.2156862745098, Blast_Score=200, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6323273, Length=250, Percent_Identity=39.6, Blast_Score=204, Evalue=1e-53, Organism=Drosophila melanogaster, GI21355531, Length=256, Percent_Identity=42.1875, Blast_Score=218, Evalue=2e-57, Organism=Drosophila melanogaster, GI24583427, Length=245, Percent_Identity=38.3673469387755, Blast_Score=194, Evalue=4e-50,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 28278; Mature: 28147
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVKIHSPAEIEMARAAGQAAAKVLEMIKPYVLAGITTDEIDRLCHDYIVNELKVIPAN CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECC IGYHGYTRTVCTSVNHVVCHGIPSDKKLKNGDIVNIDVAIIKEGWYGDTSRMYFVGEPSV CCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC RAKRLVDITYQSMVAGIKAVRPGATLGDIGASIQQLAEGAGFSVVREYCGHGVGQEYHTA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHH PQVLHYGIAQTGMLLKPGMIFTIEPMINAGKAATSVLSDGWTVVTKDRSLSAQWEHTIAV HHHHHHHHHHCCEEECCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEEEE TESGYDLLTPWPEGTGEYEAI EECCCEEECCCCCCCCCCCCC >Mature Secondary Structure TEVKIHSPAEIEMARAAGQAAAKVLEMIKPYVLAGITTDEIDRLCHDYIVNELKVIPAN CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECC IGYHGYTRTVCTSVNHVVCHGIPSDKKLKNGDIVNIDVAIIKEGWYGDTSRMYFVGEPSV CCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC RAKRLVDITYQSMVAGIKAVRPGATLGDIGASIQQLAEGAGFSVVREYCGHGVGQEYHTA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHH PQVLHYGIAQTGMLLKPGMIFTIEPMINAGKAATSVLSDGWTVVTKDRSLSAQWEHTIAV HHHHHHHHHHCCEEECCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEEEE TESGYDLLTPWPEGTGEYEAI EECCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]