| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is trpE [H]
Identifier: 153947463
GI number: 153947463
Start: 2236052
End: 2237617
Strand: Direct
Name: trpE [H]
Synonym: YpsIP31758_1932
Alternate gene names: 153947463
Gene position: 2236052-2237617 (Clockwise)
Preceding gene: 153949245
Following gene: 153948928
Centisome position: 47.34
GC content: 50.13
Gene sequence:
>1566_bases ATGATGCAAACATCACGTCCTACTTTACAGTTACTCACCGCTAGCGCCTGTTACCGCGATGACCCGACAGCGCTGTTTCA TCAATTATGTGGTGCCCGCCCCGCGACCCTATTGCTTGAGTCTGCAGAAGTTGACAACAAGCAGAATCTGAAAAGCCTGT TGGTCATCGATAGCGCCTTGCGTATCACGGCATTAGGGCAAACCGTCACTCTCGAAGCATTGACCCGTAATGGGGCTTCT TTATTACCACTGCTGGATGCAAGTTTGCCCACTGAAGTCGATATTCAGGTTCGTCCGAATGGCCGAGAGTTAACTTTCCC GTTAATAAATGAAGTTCAGGATGAGGATTCACGCTTACAGTCCTTATCTGTTTTTGATGCTTTACGTCAATTATTAACAC TGGTTAATACCCCACTTGGCGAGCGTGAGGCCCTGTTTTTGGGCGGTTTGTTCGCTTACGATTTAGTCGCTGGTTTTGAA AATTTGCCTCCGTTGCGTCAGGATCAACGCTGCCCTGACTTCTGTTTCTATTTAGCCGAGACATTGCTGGTTTTGGATCA TCAACATCGTTCAACTCGCTTGCAGGCCAGCCTGTTCACGCCAGACAGTTCAGAGTATCAGCGCCTGGCGACCCGCTTAG AACAACTCAGCCACCAGTTACAACAAGCGCCACACCCCATCCCTGCAACCTCAGTCCCGGAGATGACGTTACAGTGTAAC CAATCAGATGAAGAGTATTGCAACGTTGTCAGTGAATTGCAGGTAGCAATCCGTGAAGGTGAGATTTTCCAGGTGGTCCC ATCCCGCCGTTTTACGCTGCCCTGCCCATCACCGCTGGCGGCCTATCAGACACTGAAAGACCATAATCCCAGCCCCTACA TGTTTTTCATGCAAGACAATGATTTTTCTCTGTTTGGCGCATCACCTGAAAGCGCACTGAAATACGATGCCAGCAACCGT CAAATTGAGATTTACCCGATTGCGGGTACTCGTCCACGCGGTCGTCGTCCTAATGGAGAACTCGATCGTGATTTAGACAG CCGTATCGAGTTGGAAATGCGTACTGACCATAAAGAGATGGCAGAACATTTAATGTTGGTGGATCTGGCTCGTAACGATC TGGCACGTATTTGCGAACCCGGTAGCCGCTATGTTGCAGATTTAACCAAAGTTGACCGTTACTCTTTTGTCATGCATCTG GTGTCCCGCGTGATTGGCACTCTGCGTCAAGATTTAGATGTGCTGCATGCTTATCAAGCGTGTATGAACATGGGTACGCT AAGCGGTGCGCCCAAAGTACGGGCCATGCAATTGATTGCCAGTAATGAAGGCTCACGCCGTGGCAGCTACGGCGGTGCAG TGGGCTACTTCACTGCTCACGGTGATTTGGATACCTGCATTGTGATTCGTTCTGCCTACGTAGAGGACGGCATCGCCACC GTACAAGCGGGTGCAGGGGTGGTTTTGGACTCAGTTCCACAAGCAGAAGCTGATGAAACTCGGAATAAAGCCAGAGCCGT ACTGCGCGCCATTGCCACTGCCCATCATGCCAAGGAGATTTTCTAA
Upstream 100 bases:
>100_bases ATCAGACAGTGCAGATTGCTTCAGCCCGCTAATAGCGGGTTTTTTTATGGATAGATTCCGGCGTAATAATTTTTCAGGGC CTCTTTTTTAGGATCACTCA
Downstream 100 bases:
>100_bases TGGCCGATATCCTACTGCTCGATAATATCGACTCCTTTACCTACAACCTGGTGGACCAACTTCGTTCCAGTGGTCATCGC GTCGTGATTTACCGTAACCA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MMQTSRPTLQLLTASACYRDDPTALFHQLCGARPATLLLESAEVDNKQNLKSLLVIDSALRITALGQTVTLEALTRNGAS LLPLLDASLPTEVDIQVRPNGRELTFPLINEVQDEDSRLQSLSVFDALRQLLTLVNTPLGEREALFLGGLFAYDLVAGFE NLPPLRQDQRCPDFCFYLAETLLVLDHQHRSTRLQASLFTPDSSEYQRLATRLEQLSHQLQQAPHPIPATSVPEMTLQCN QSDEEYCNVVSELQVAIREGEIFQVVPSRRFTLPCPSPLAAYQTLKDHNPSPYMFFMQDNDFSLFGASPESALKYDASNR QIEIYPIAGTRPRGRRPNGELDRDLDSRIELEMRTDHKEMAEHLMLVDLARNDLARICEPGSRYVADLTKVDRYSFVMHL VSRVIGTLRQDLDVLHAYQACMNMGTLSGAPKVRAMQLIASNEGSRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIAT VQAGAGVVLDSVPQAEADETRNKARAVLRAIATAHHAKEIF
Sequences:
>Translated_521_residues MMQTSRPTLQLLTASACYRDDPTALFHQLCGARPATLLLESAEVDNKQNLKSLLVIDSALRITALGQTVTLEALTRNGAS LLPLLDASLPTEVDIQVRPNGRELTFPLINEVQDEDSRLQSLSVFDALRQLLTLVNTPLGEREALFLGGLFAYDLVAGFE NLPPLRQDQRCPDFCFYLAETLLVLDHQHRSTRLQASLFTPDSSEYQRLATRLEQLSHQLQQAPHPIPATSVPEMTLQCN QSDEEYCNVVSELQVAIREGEIFQVVPSRRFTLPCPSPLAAYQTLKDHNPSPYMFFMQDNDFSLFGASPESALKYDASNR QIEIYPIAGTRPRGRRPNGELDRDLDSRIELEMRTDHKEMAEHLMLVDLARNDLARICEPGSRYVADLTKVDRYSFVMHL VSRVIGTLRQDLDVLHAYQACMNMGTLSGAPKVRAMQLIASNEGSRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIAT VQAGAGVVLDSVPQAEADETRNKARAVLRAIATAHHAKEIF >Mature_521_residues MMQTSRPTLQLLTASACYRDDPTALFHQLCGARPATLLLESAEVDNKQNLKSLLVIDSALRITALGQTVTLEALTRNGAS LLPLLDASLPTEVDIQVRPNGRELTFPLINEVQDEDSRLQSLSVFDALRQLLTLVNTPLGEREALFLGGLFAYDLVAGFE NLPPLRQDQRCPDFCFYLAETLLVLDHQHRSTRLQASLFTPDSSEYQRLATRLEQLSHQLQQAPHPIPATSVPEMTLQCN QSDEEYCNVVSELQVAIREGEIFQVVPSRRFTLPCPSPLAAYQTLKDHNPSPYMFFMQDNDFSLFGASPESALKYDASNR QIEIYPIAGTRPRGRRPNGELDRDLDSRIELEMRTDHKEMAEHLMLVDLARNDLARICEPGSRYVADLTKVDRYSFVMHL VSRVIGTLRQDLDVLHAYQACMNMGTLSGAPKVRAMQLIASNEGSRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIAT VQAGAGVVLDSVPQAEADETRNKARAVLRAIATAHHAKEIF
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=520, Percent_Identity=75.9615384615385, Blast_Score=798, Evalue=0.0, Organism=Escherichia coli, GI1788114, Length=365, Percent_Identity=32.0547945205479, Blast_Score=165, Evalue=6e-42, Organism=Escherichia coli, GI87082077, Length=297, Percent_Identity=26.5993265993266, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=377, Percent_Identity=39.2572944297082, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324361, Length=300, Percent_Identity=29, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 57899; Mature: 57899
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQTSRPTLQLLTASACYRDDPTALFHQLCGARPATLLLESAEVDNKQNLKSLLVIDSAL CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHHHHHH RITALGQTVTLEALTRNGASLLPLLDASLPTEVDIQVRPNGRELTFPLINEVQDEDSRLQ HEEECCCEEEEHHHHCCCCCEEHHHCCCCCCEEEEEECCCCCEEEHHHHHHHCCHHHHHH SLSVFDALRQLLTLVNTPLGEREALFLGGLFAYDLVAGFENLPPLRQDQRCPDFCFYLAE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH TLLVLDHQHRSTRLQASLFTPDSSEYQRLATRLEQLSHQLQQAPHPIPATSVPEMTLQCN HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC QSDEEYCNVVSELQVAIREGEIFQVVPSRRFTLPCPSPLAAYQTLKDHNPSPYMFFMQDN CCHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECC DFSLFGASPESALKYDASNRQIEIYPIAGTRPRGRRPNGELDRDLDSRIELEMRTDHKEM CEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHH AEHLMLVDLARNDLARICEPGSRYVADLTKVDRYSFVMHLVSRVIGTLRQDLDVLHAYQA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CMNMGTLSGAPKVRAMQLIASNEGSRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIAT HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCHHH VQAGAGVVLDSVPQAEADETRNKARAVLRAIATAHHAKEIF HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMQTSRPTLQLLTASACYRDDPTALFHQLCGARPATLLLESAEVDNKQNLKSLLVIDSAL CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHHHHHH RITALGQTVTLEALTRNGASLLPLLDASLPTEVDIQVRPNGRELTFPLINEVQDEDSRLQ HEEECCCEEEEHHHHCCCCCEEHHHCCCCCCEEEEEECCCCCEEEHHHHHHHCCHHHHHH SLSVFDALRQLLTLVNTPLGEREALFLGGLFAYDLVAGFENLPPLRQDQRCPDFCFYLAE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH TLLVLDHQHRSTRLQASLFTPDSSEYQRLATRLEQLSHQLQQAPHPIPATSVPEMTLQCN HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC QSDEEYCNVVSELQVAIREGEIFQVVPSRRFTLPCPSPLAAYQTLKDHNPSPYMFFMQDN CCHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECC DFSLFGASPESALKYDASNRQIEIYPIAGTRPRGRRPNGELDRDLDSRIELEMRTDHKEM CEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHH AEHLMLVDLARNDLARICEPGSRYVADLTKVDRYSFVMHLVSRVIGTLRQDLDVLHAYQA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CMNMGTLSGAPKVRAMQLIASNEGSRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIAT HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCHHH VQAGAGVVLDSVPQAEADETRNKARAVLRAIATAHHAKEIF HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11371633; 4598537; 366432; 7007652 [H]