| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is tauD [H]
Identifier: 153947413
GI number: 153947413
Start: 4412916
End: 4413764
Strand: Reverse
Name: tauD [H]
Synonym: YpsIP31758_3935
Alternate gene names: 153947413
Gene position: 4413764-4412916 (Counterclockwise)
Preceding gene: 153947400
Following gene: 153950796
Centisome position: 93.45
GC content: 51.35
Gene sequence:
>849_bases ATGAATGAACGTCTGATTGTGACGCCTTTGGGGCCGCATATTGGTGCGCTGGTTGAAAATATTAATATTGCGCACCCGTT GGGAGATAGCCAGTTTGAACAGCTTTATCATGTGTTGCTCAAACATCAGGTACTGTTTTTCCGTAATCAACCGATCACAC CGTTACAGCAGCGAGACCTGGCCGGGCGCTTTGGTGATTTGCATATTCACCCGGTTTATCCGCATACCCAAGAGTGTGAA GAAATTATCGTTTTGGATACCGCCGACGATAACCCACCGGATAATGACAACTGGCACACTGACGTCACGTTTATCGAAAC GCCGCCATTAGGGGCGATTTTAGCCGCCAAACAGCTGCCGACAACCGGTGGTGATACCTTGTGGAGTAGCGGAATTGCCG CTTATGACGCGCTTTCGGCCCCGTTTAAACAGCTATTGGCCGGGTTACAGGCCGAACACGATTTCACTAAATCTTTCCCT GAGCACAAGCACCGCACCACGCCAGAAGAGCATCAACGCTGGTTACAGGGAAAAGAGAAGAACCCGCCATTACTGCATCC GGTGATACGTACTCATCCGGTGAGTGGGCGTCAGGCATTATTCGTAAACGAAGGGTTTACGACTCGAATCATCGGATTGA GTGATAAAGAAAGCGAGGCATTACTGGGTTTTTTATTCGCTCACACCACTAAACCGGAGTTCCAGGTCCGTTGGCGCTGG CAGCAAGATGATGTCGCTATTTGGGATAACCGTGTGACACAGCATTACGCCAATGCCGACTACCTACCGCAGCGGCGGGT GATGCATCGGGCGACGATTCTGGGTGATAGGCCGGTGTTCCGGCCCTGA
Upstream 100 bases:
>100_bases TCATTGCCGGTATCAGTGTGATTGCCATTATTGCTTTTGGGATGGAGTTAAGTTTACGGGCGATTCAACGCCGGTTAACG CCTTGGTATGGAGAACAACA
Downstream 100 bases:
>100_bases TCTATGGCGTTATTAATCTGTGGTCAACAGTGAACGGGCGGCAGACTCGACAGCATCAACATGGATGTCTTCAACTTGTG GCCCGGCATGGACGACCACA
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MNERLIVTPLGPHIGALVENINIAHPLGDSQFEQLYHVLLKHQVLFFRNQPITPLQQRDLAGRFGDLHIHPVYPHTQECE EIIVLDTADDNPPDNDNWHTDVTFIETPPLGAILAAKQLPTTGGDTLWSSGIAAYDALSAPFKQLLAGLQAEHDFTKSFP EHKHRTTPEEHQRWLQGKEKNPPLLHPVIRTHPVSGRQALFVNEGFTTRIIGLSDKESEALLGFLFAHTTKPEFQVRWRW QQDDVAIWDNRVTQHYANADYLPQRRVMHRATILGDRPVFRP
Sequences:
>Translated_282_residues MNERLIVTPLGPHIGALVENINIAHPLGDSQFEQLYHVLLKHQVLFFRNQPITPLQQRDLAGRFGDLHIHPVYPHTQECE EIIVLDTADDNPPDNDNWHTDVTFIETPPLGAILAAKQLPTTGGDTLWSSGIAAYDALSAPFKQLLAGLQAEHDFTKSFP EHKHRTTPEEHQRWLQGKEKNPPLLHPVIRTHPVSGRQALFVNEGFTTRIIGLSDKESEALLGFLFAHTTKPEFQVRWRW QQDDVAIWDNRVTQHYANADYLPQRRVMHRATILGDRPVFRP >Mature_282_residues MNERLIVTPLGPHIGALVENINIAHPLGDSQFEQLYHVLLKHQVLFFRNQPITPLQQRDLAGRFGDLHIHPVYPHTQECE EIIVLDTADDNPPDNDNWHTDVTFIETPPLGAILAAKQLPTTGGDTLWSSGIAAYDALSAPFKQLLAGLQAEHDFTKSFP EHKHRTTPEEHQRWLQGKEKNPPLLHPVIRTHPVSGRQALFVNEGFTTRIIGLSDKESEALLGFLFAHTTKPEFQVRWRW QQDDVAIWDNRVTQHYANADYLPQRRVMHRATILGDRPVFRP
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=281, Percent_Identity=76.1565836298932, Blast_Score=464, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6322971, Length=291, Percent_Identity=31.6151202749141, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 32196; Mature: 32196
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERLIVTPLGPHIGALVENINIAHPLGDSQFEQLYHVLLKHQVLFFRNQPITPLQQRDL CCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHH AGRFGDLHIHPVYPHTQECEEIIVLDTADDNPPDNDNWHTDVTFIETPPLGAILAAKQLP CCCCCCEEEEECCCCHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCC TTGGDTLWSSGIAAYDALSAPFKQLLAGLQAEHDFTKSFPEHKHRTTPEEHQRWLQGKEK CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCC NPPLLHPVIRTHPVSGRQALFVNEGFTTRIIGLSDKESEALLGFLFAHTTKPEFQVRWRW CCCEECHHHHCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE QQDDVAIWDNRVTQHYANADYLPQRRVMHRATILGDRPVFRP CCCCEEECCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNERLIVTPLGPHIGALVENINIAHPLGDSQFEQLYHVLLKHQVLFFRNQPITPLQQRDL CCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHH AGRFGDLHIHPVYPHTQECEEIIVLDTADDNPPDNDNWHTDVTFIETPPLGAILAAKQLP CCCCCCEEEEECCCCHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCC TTGGDTLWSSGIAAYDALSAPFKQLLAGLQAEHDFTKSFPEHKHRTTPEEHQRWLQGKEK CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCC NPPLLHPVIRTHPVSGRQALFVNEGFTTRIIGLSDKESEALLGFLFAHTTKPEFQVRWRW CCCEECHHHHCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE QQDDVAIWDNRVTQHYANADYLPQRRVMHRATILGDRPVFRP CCCCEEECCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]