| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is tauC [H]
Identifier: 153947400
GI number: 153947400
Start: 4413761
End: 4414615
Strand: Reverse
Name: tauC [H]
Synonym: YpsIP31758_3936
Alternate gene names: 153947400
Gene position: 4414615-4413761 (Counterclockwise)
Preceding gene: 153947789
Following gene: 153947413
Centisome position: 93.46
GC content: 54.5
Gene sequence:
>855_bases ATGAGCCTGCACAGTACGTTACGTAATCAGGCGATTAATCTGCCCGCTGCAGATGCACCGAAAAAAACGCCCCGCCGTTT ACCTGCCAATCAGACGCTGTGGATCAGTATCGCCACGTTGGCTTCGGTGGTGGCTTTATGGTGGGCAGTCACGGCGTTAC AGCTTATCGGCCCGTTATTTTTACCTGCTCCACAGCAGGTCTTGCATCAGCTATGGACCATTGCCAGCCCGCAAGGGTTT ATGGATGCCACGCTATGGCAGCATCTGGCTGCTAGCCTTGGGCGAATTTTCGTTGCGTTGTTGGCGGCAGTGGTACTGGG GGTCCCTACCGGGATCGCCATGGGGCTGAACAGTAACGTTCGTGGTGTGTTGGATCCGTTAATTGAGATTTATCGTCCGG TACCGCCGTTGGCTTATCTACCGCTGATGGTTATCTGGTTCGGTATTGGCGAAACCTCAAAAATCCTACTGATTTATTTG GCGATATTTGCGCCAGTGACGTTGGCGGCGGTTGCGGGTGTGCGCAGCGTGGCACACGTTCGAGTGAGGGCCGCCCGTGC ATTAGGTGCCAGCCGTTGGCAGGTTTTATGGTTTGTGGTGTTGCCCAGCGCCTTGCCGGAGATTTTAACCGGTATCCGCA TCGGCCTGGGGGTTGGGTGGTCCACTTTGGTGGCCGCTGAGCTGATTGCCGCGACACGGGGATTGGGCTTTATGGTGCAA TCCGCCGGTGAGTTTTTGGCAACAGATGTGGTCATTGCCGGTATCAGTGTGATTGCCATTATTGCTTTTGGGATGGAGTT AAGTTTACGGGCGATTCAACGCCGGTTAACGCCTTGGTATGGAGAACAACAATGA
Upstream 100 bases:
>100_bases CCGAGGGTGAACCTTGCCGTGCTATTAAGTCGGATCCTGAATTTATCGCCCGCCGTGAAGACGTGTTGGGTAAAGTCTTC CAACAGCGGGAGGTGTTGAT
Downstream 100 bases:
>100_bases ATGAACGTCTGATTGTGACGCCTTTGGGGCCGCATATTGGTGCGCTGGTTGAAAATATTAATATTGCGCACCCGTTGGGA GATAGCCAGTTTGAACAGCT
Product: taurine transporter subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSLHSTLRNQAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLFLPAPQQVLHQLWTIASPQGF MDATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYL AIFAPVTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQ SAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPWYGEQQ
Sequences:
>Translated_284_residues MSLHSTLRNQAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLFLPAPQQVLHQLWTIASPQGF MDATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYL AIFAPVTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQ SAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPWYGEQQ >Mature_283_residues SLHSTLRNQAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLFLPAPQQVLHQLWTIASPQGFM DATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLA IFAPVTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQS AGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPWYGEQQ
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=264, Percent_Identity=75.7575757575758, Blast_Score=374, Evalue=1e-105, Organism=Escherichia coli, GI87081802, Length=245, Percent_Identity=34.2857142857143, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1789033, Length=172, Percent_Identity=29.0697674418605, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30506; Mature: 30375
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHSTLRNQAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLF CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC LPAPQQVLHQLWTIASPQGFMDATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC RGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVTLAAVAGVRSVAHV HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHH SAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPWYGEQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLHSTLRNQAINLPAADAPKKTPRRLPANQTLWISIATLASVVALWWAVTALQLIGPLF CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC LPAPQQVLHQLWTIASPQGFMDATLWQHLAASLGRIFVALLAAVVLGVPTGIAMGLNSNV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC RGVLDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVTLAAVAGVRSVAHV HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVRAARALGASRWQVLWFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHH SAGEFLATDVVIAGISVIAIIAFGMELSLRAIQRRLTPWYGEQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]