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The map label for this gene is fkpB [H]

Identifier: 153947325

GI number: 153947325

Start: 3896939

End: 3897397

Strand: Reverse

Name: fkpB [H]

Synonym: YpsIP31758_3458

Alternate gene names: 153947325

Gene position: 3897397-3896939 (Counterclockwise)

Preceding gene: 153947776

Following gene: 153950430

Centisome position: 82.51

GC content: 48.37

Gene sequence:

>459_bases
GTGCAAAATAATAGTGCTGTTTTAGTGCATTTCACTCTGAAGCTTGAAGATGGTTCAACGGCCGAGTCAACACGCACTCA
CGGTAAACCGGCGCTCTTTCGTTTAGGTGATAACAGCCTTTCTGATGCACTGGAACAGCAATTGTTGGGGCTGACCGTGG
GTGATAAGCACGCTTTTACATTACGGCCTGAAGATGCTTTTGGTGTAGAAAATCCGGACCTTATTCAGTATTTCACCCCA
CGTGATTTTGCTGAGACCGGTGTGCCAGATGCCGGCACCATCATGTTATTCAGCTCTCGCGATGGCAGCGAAATGCCGGG
TGTCGTGCGGGAGGTCGCAGAAGAGTCTATTACTGTTGATTTTAATCACCCGTTGGCTGGGCACTCTGTCAGTTTTGAAC
TTGAAATACTGGAGATTGACCCCCAACAGGAGGTTGTCTATGCAGATATTGCTGGCTAA

Upstream 100 bases:

>100_bases
GCAGAAAAAAACGCGGTGAATAAAAATGAGTGATATGTCCGAATCTGTGCAAGATACCGAATTGGTACAAAATACTGGAA
CGGTAAAAACGACTGACGCG

Downstream 100 bases:

>100_bases
CCCACGTGGCTTTTGTGCTGGCGTTGACCGGGCTATCAGTATTGTTGAACGTGCGATAGAAATGTATGGCGCGCCAATTT
ATGTACGCCATGAGGTGGTA

Product: peptidyl-prolyl cis-trans isomerase, FKBP-type

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQNNSAVLVHFTLKLEDGSTAESTRTHGKPALFRLGDNSLSDALEQQLLGLTVGDKHAFTLRPEDAFGVENPDLIQYFTP
RDFAETGVPDAGTIMLFSSRDGSEMPGVVREVAEESITVDFNHPLAGHSVSFELEILEIDPQQEVVYADIAG

Sequences:

>Translated_152_residues
MQNNSAVLVHFTLKLEDGSTAESTRTHGKPALFRLGDNSLSDALEQQLLGLTVGDKHAFTLRPEDAFGVENPDLIQYFTP
RDFAETGVPDAGTIMLFSSRDGSEMPGVVREVAEESITVDFNHPLAGHSVSFELEILEIDPQQEVVYADIAG
>Mature_152_residues
MQNNSAVLVHFTLKLEDGSTAESTRTHGKPALFRLGDNSLSDALEQQLLGLTVGDKHAFTLRPEDAFGVENPDLIQYFTP
RDFAETGVPDAGTIMLFSSRDGSEMPGVVREVAEESITVDFNHPLAGHSVSFELEILEIDPQQEVVYADIAG

Specific function: PPIases accelerate the folding of proteins. Substrate specificity carried out with 'Suc-Ala-Xaa-Pro-Phe-4-nitroanilide', where Xaa is the amino acid tested, was found to be Phe > Leu >> Ile > Lys = Ala > Trp > His >> Gln [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=144, Percent_Identity=68.75, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 16561; Mature: 16561

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNSAVLVHFTLKLEDGSTAESTRTHGKPALFRLGDNSLSDALEQQLLGLTVGDKHAFT
CCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEECCCEEEE
LRPEDAFGVENPDLIQYFTPRDFAETGVPDAGTIMLFSSRDGSEMPGVVREVAEESITVD
ECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEE
FNHPLAGHSVSFELEILEIDPQQEVVYADIAG
ECCCCCCCEEEEEEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MQNNSAVLVHFTLKLEDGSTAESTRTHGKPALFRLGDNSLSDALEQQLLGLTVGDKHAFT
CCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEECCCEEEE
LRPEDAFGVENPDLIQYFTPRDFAETGVPDAGTIMLFSSRDGSEMPGVVREVAEESITVD
ECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEE
FNHPLAGHSVSFELEILEIDPQQEVVYADIAG
ECCCCCCCEEEEEEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]