| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is pntA [H]
Identifier: 153947200
GI number: 153947200
Start: 2117057
End: 2118583
Strand: Direct
Name: pntA [H]
Synonym: YpsIP31758_1830
Alternate gene names: 153947200
Gene position: 2117057-2118583 (Clockwise)
Preceding gene: 153947820
Following gene: 153947119
Centisome position: 44.82
GC content: 51.41
Gene sequence:
>1527_bases ATGCGTATTGGTGTACCAAGAGAGCGGTTGGCCAATGAAGCCAGGGTTGCAGCAACGCCGAAAACGGTGGAACAATTGCT GAAATTAGGCTTCACCGTGGCAATTGAAAGTGGAGCGGGGCATTTAGCCAGCTTTGACGATGCGGCGTACCAAGAAGCGG GTGCCATCATTACGGATACCACTGATGTGTGGCAATCCGATCTTATCCTGAAGGTGAATGCTCCCTTTGAGGATGAAATT GCGCTGATGCGTGAGGGGAGCACGTTGGTCAGTTTTATTTGGCCCGCTCAGAACCCTGAGTTGCTGCAAAAACTGGCAGA GCGTCAAGTTACTGCATTAGCGATGGATTCAGTGCCGCGTATCTCCCGTGCGCAATCCATGGATGCCCTCAGCTCCATGG CAAATATTGCCGGTTACCGTGCCATTGTTGAAGCGGCTCATGAATTTGGCCGTTTCTTCACCGGGCAGATCACCGCGGCG GGTAAAGTTCCACCTGCGAAGGTGATGGTTATTGGTGCCGGAGTCGCTGGTCTGGCGGCTATCGGTGCGGCGGGGAGCCT CGGGGCTATCGTGCGTGCTTTTGACACCCGTCCTGAAGTAAAAGAACAAGTCCAGAGTATGGGCGCTGAATTCCTTGAAT TGGATTTTGAAGAGGAGGCGGGCAGTGGCGATGGTTACGCCAAAGTGATGTCCGAGGCTTTTATCAAAGCTGAGATGGAA CTGTTTGCCGCGCAAGCCGCAGAAGTGGACATTATCGTCACTACCGCGCTGATCCCTGGTAGACCAGCACCGCGCCTGAT CACTAAAGATATGGTGGCGTCGATGAAGTCGGGCAGCGTGATTGTCGATCTGGCGGCTCAGACAGGCGGTAACTGTGAGT TGACGGTAGCTGATAAAGTCACCATCACGGAAAATGGCGTAAAAATCATTGGCTATACAGATCTGCCAAGCCGCTTACCG ACGCAGTCTTCACAGCTCTATGGTACTAACCTCGTTAACTTATTGAAGTTACTTTGCAAAGAGAAAAACGGCGAGATCGA TATTGATTTCGACGATACCGTGATTCGCGGTGTTACTGTGGTTAAAACTGGCGAAGTGACTTGGCCTGCACCACCTATTC AGGTTTCAGCTCAGCCGCAGGCTGCCAAAGCGGCCCCAATAGTGAAGGAAGAAACGAAGCCCTCATCACCGTGGACCAAA TACATCATTATGGCGGTTGCTATGGTGTTGTTTGGTTGGTTGGCGAATGTGGCACCACCAGAATTCTTGTCTCACTTTAC GGTCTTTGCACTGGCGTGTGTAGTCGGTTACTACGTGGTGTGGAATGTCAGCCATGCGCTGCATACACCGCTGATGTCAG TCACTAACGCGATTTCGGGCATTATTGTGGTTGGCGCGTTGTTGCAGATTGGTCATGGTGGCTGGGTAAGTTTCTTCTCC TTTATTGCCGTACTGATTGCTAGCATCAACATTTTTGGTGGCTTCACTGTCACCCAGCGCATGCTGAAAATGTTCCGTAA AAACTAA
Upstream 100 bases:
>100_bases AGGGAGCGTAACTCAGCAGGTTTTGTCGGTGAACAAACAGAACCGAACGATAAGCAGGATGACAATACTCATCATCAAAA ACAGGTAAAAAGGGGACATT
Downstream 100 bases:
>100_bases TGTTCTGTAAAAACCAAGCTACATAGAAATTAGCTGGTATAAAAATGTCATATAAAAACAAAGGGGTAACTGATGTCTAG TGGTCTCGTTACAGCTGCGT
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDTTDVWQSDLILKVNAPFEDEI ALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME LFAAQAAEVDIIVTTALIPGRPAPRLITKDMVASMKSGSVIVDLAAQTGGNCELTVADKVTITENGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTVVKTGEVTWPAPPIQVSAQPQAAKAAPIVKEETKPSSPWTK YIIMAVAMVLFGWLANVAPPEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS FIAVLIASINIFGGFTVTQRMLKMFRKN
Sequences:
>Translated_508_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDTTDVWQSDLILKVNAPFEDEI ALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME LFAAQAAEVDIIVTTALIPGRPAPRLITKDMVASMKSGSVIVDLAAQTGGNCELTVADKVTITENGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTVVKTGEVTWPAPPIQVSAQPQAAKAAPIVKEETKPSSPWTK YIIMAVAMVLFGWLANVAPPEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS FIAVLIASINIFGGFTVTQRMLKMFRKN >Mature_508_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDTTDVWQSDLILKVNAPFEDEI ALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME LFAAQAAEVDIIVTTALIPGRPAPRLITKDMVASMKSGSVIVDLAAQTGGNCELTVADKVTITENGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTVVKTGEVTWPAPPIQVSAQPQAAKAAPIVKEETKPSSPWTK YIIMAVAMVLFGWLANVAPPEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS FIAVLIASINIFGGFTVTQRMLKMFRKN
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=532, Percent_Identity=50.5639097744361, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI122939153, Length=532, Percent_Identity=50.5639097744361, Blast_Score=484, Evalue=1e-136, Organism=Escherichia coli, GI1787887, Length=510, Percent_Identity=83.1372549019608, Blast_Score=867, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=518, Percent_Identity=49.6138996138996, Blast_Score=470, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 54302; Mature: 54302
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00836 ALADH_PNT_1 ; PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDT CCCCCCHHHHCCCHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCEEECC TDVWQSDLILKVNAPFEDEIALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPR HHHHCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCH ISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCCCCCCEEEEEECCHHHHHH IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME HCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCHHCCCCCCHHHHHHHHHHHHHHHH LFAAQAAEVDIIVTTALIPGRPAPRLITKDMVASMKSGSVIVDLAAQTGGNCELTVADKV HHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECEE TITENGVKIIGYTDLPSRLPTQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTV EEECCCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCEEECCCCHHHCCEEE VKTGEVTWPAPPIQVSAQPQAAKAAPIVKEETKPSSPWTKYIIMAVAMVLFGWLANVAPP EEECCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDT CCCCCCHHHHCCCHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCEEECC TDVWQSDLILKVNAPFEDEIALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPR HHHHCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCH ISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCCCCCCEEEEEECCHHHHHH IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME HCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCHHCCCCCCHHHHHHHHHHHHHHHH LFAAQAAEVDIIVTTALIPGRPAPRLITKDMVASMKSGSVIVDLAAQTGGNCELTVADKV HHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECEE TITENGVKIIGYTDLPSRLPTQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTV EEECCCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCEEECCCCHHHCCEEE VKTGEVTWPAPPIQVSAQPQAAKAAPIVKEETKPSSPWTKYIIMAVAMVLFGWLANVAPP EEECCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]