Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153947820

Identifier: 153947820

GI number: 153947820

Start: 2113473

End: 2113889

Strand: Direct

Name: 153947820

Synonym: YpsIP31758_1827

Alternate gene names: NA

Gene position: 2113473-2113889 (Clockwise)

Preceding gene: 153950727

Following gene: 153947200

Centisome position: 44.75

GC content: 43.41

Gene sequence:

>417_bases
ATGAGTGGCGAACGCGTCAGTGCACCACAGTGCAGTGGAAAAGTCTGCTTTGATTACACGGAATTTCTCGCTGCTTCTTG
CAAGAAGCATTGGAGCTTTGTTGACGCTATTTATGGCGTGATGCCTATTTTTGGTATGGTGGTGAAGTCACAAACTGAAT
TAGGGAGAACGCCGCAAGCTCAGCTTACGGCATTGGCGCTGCAAGTATTATCAACACAACTCAATGATGAGACCAATATT
ATTCGATTGATTAAATTAGCAAAACAGCGTGGCATCACCGTATTGGACATCCAATTGCCTTACCCATTGGAAGCGGCTCA
ACTTAGAACAATCAAGCAGAAATTCCCCGCTGAAATGGCATTGAGTCAGAAAGATGAATGTCTATCTGTGAATTTATCCC
AAATGCCAAATGATTAG

Upstream 100 bases:

>100_bases
ATGGTTATTATATCGTCATCTTTATTTGGTTTCGTCTATCGTTTATATACCAAGCCCCTTAATGACTGAATAGCTGTATT
GATCAACTGAGGATGAAGGG

Downstream 100 bases:

>100_bases
TTTTTGAAGAACCGGTCACTAACCTAGTGCATCATCAACCATGTCGCTGGGATAGTGGCGAGTAACACGAGGAAAATCGC
CGCCCGCTCAACCGTATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELGRTPQAQLTALALQVLSTQLNDETNI
IRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMALSQKDECLSVNLSQMPND

Sequences:

>Translated_138_residues
MSGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELGRTPQAQLTALALQVLSTQLNDETNI
IRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMALSQKDECLSVNLSQMPND
>Mature_137_residues
SGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELGRTPQAQLTALALQVLSTQLNDETNII
RLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMALSQKDECLSVNLSQMPND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15321; Mature: 15190

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELGRTPQA
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QLTALALQVLSTQLNDETNIIRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCHHHH
LSQKDECLSVNLSQMPND
HCCCCCCEECCHHCCCCC
>Mature Secondary Structure 
SGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELGRTPQA
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QLTALALQVLSTQLNDETNIIRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCHHHH
LSQKDECLSVNLSQMPND
HCCCCCCEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA